Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 DFFB-203ENST00000341385 572 ntTSL 5 BASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 CD99-202ENST00000381180 530 ntTSL 2 BASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 HAUS4P1-201ENST00000406739 1145 ntBASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 LAGE3P1-201ENST00000425356 484 ntBASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 KRT18P31-201ENST00000506277 1292 ntBASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAV5A0A0B4J249 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 AC073621.1-201ENST00000392730 636 ntBASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 MTRF1LP2-201ENST00000506027 1122 ntBASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 TPM1-218ENST00000559281 851 ntTSL 5 BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 PNMT-203ENST00000581428 677 ntTSL 2 BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 AC107918.4-202ENST00000641623 219 ntBASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC12.56□□□□□ -0.4
TRAV5A0A0B4J249 PCDHA3-202ENST00000532566 4594 ntBASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 MECR-202ENST00000373791 2416 ntTSL 2 BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV5A0A0B4J249 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms