Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC091812.2-201ENST00000619081 385 ntBASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 U82695.1-201ENST00000635752 1889 ntBASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 MBP-202ENST00000355994 2772 ntTSL 5 BASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 AC092364.2-201ENST00000596710 2692 ntBASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 AC005622.1-201ENST00000636801 1703 ntBASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 AC006449.6-201ENST00000612330 2296 ntBASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 FAM58CP-201ENST00000435741 640 ntBASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 AC099522.2-201ENST00000607001 744 ntBASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
HLA-DRB4X5D2U9 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 AKAP8P1-201ENST00000434743 1349 ntBASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 PMP22-202ENST00000395936 816 ntTSL 3 BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 FABP5-202ENST00000396359 986 ntTSL 5 BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HLA-DRB4X5D2U9 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms