Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 RRP7BP-205ENST00000566851 833 ntBASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 AC008494.3-201ENST00000606615 944 ntBASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 AC074044.1-201ENST00000609673 707 ntBASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 AL008721.1-201ENST00000609964 604 ntBASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CSNK1G3Q9Y6M4 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 AL512384.1-201ENST00000406683 331 ntBASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 U91328.1-201ENST00000437528 223 ntBASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 AC007431.3-201ENST00000623221 587 ntBASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSNK1G3Q9Y6M4 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.73■□□□□ 0.11
CSNK1G3Q9Y6M4 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CSNK1G3Q9Y6M4 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
CSNK1G3Q9Y6M4 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CSNK1G3Q9Y6M4 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
CSNK1G3Q9Y6M4 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
CSNK1G3Q9Y6M4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CSNK1G3Q9Y6M4 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CSNK1G3Q9Y6M4 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CSNK1G3Q9Y6M4 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CSNK1G3Q9Y6M4 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CSNK1G3Q9Y6M4 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CSNK1G3Q9Y6M4 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.73■□□□□ 0.11
CSNK1G3Q9Y6M4 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CSNK1G3Q9Y6M4 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.73■□□□□ 0.11
CSNK1G3Q9Y6M4 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CSNK1G3Q9Y6M4 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CSNK1G3Q9Y6M4 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
CSNK1G3Q9Y6M4 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.73■□□□□ 0.11
CSNK1G3Q9Y6M4 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.73■□□□□ 0.11
CSNK1G3Q9Y6M4 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.73■□□□□ 0.11
CSNK1G3Q9Y6M4 INE1-201ENST00000456273 945 ntBASIC15.73■□□□□ 0.11
CSNK1G3Q9Y6M4 GPR53P-205ENST00000457298 1084 ntBASIC15.73■□□□□ 0.11
CSNK1G3Q9Y6M4 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CSNK1G3Q9Y6M4 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.73■□□□□ 0.11
CSNK1G3Q9Y6M4 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.73■□□□□ 0.11
CSNK1G3Q9Y6M4 TIMM17BP1-201ENST00000545713 516 ntBASIC15.73■□□□□ 0.11
CSNK1G3Q9Y6M4 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CSNK1G3Q9Y6M4 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.73■□□□□ 0.11
CSNK1G3Q9Y6M4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.73■□□□□ 0.11
CSNK1G3Q9Y6M4 AC025048.3-201ENST00000590609 569 ntBASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms