Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL4A3BPQ9Y5P4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18■□□□□ 0.47
COL4A3BPQ9Y5P4 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL4A3BPQ9Y5P4 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
COL4A3BPQ9Y5P4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL4A3BPQ9Y5P4 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
COL4A3BPQ9Y5P4 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL4A3BPQ9Y5P4 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL4A3BPQ9Y5P4 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL4A3BPQ9Y5P4 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18■□□□□ 0.47
COL4A3BPQ9Y5P4 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL4A3BPQ9Y5P4 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL4A3BPQ9Y5P4 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
COL4A3BPQ9Y5P4 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18■□□□□ 0.47
COL4A3BPQ9Y5P4 INGX-202ENST00000489074 768 ntBASIC18■□□□□ 0.47
COL4A3BPQ9Y5P4 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL4A3BPQ9Y5P4 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18■□□□□ 0.47
COL4A3BPQ9Y5P4 BANF1P1-201ENST00000553684 263 ntBASIC18■□□□□ 0.47
COL4A3BPQ9Y5P4 AC105021.1-202ENST00000570572 669 ntBASIC18■□□□□ 0.47
COL4A3BPQ9Y5P4 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18■□□□□ 0.47
COL4A3BPQ9Y5P4 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18■□□□□ 0.47
COL4A3BPQ9Y5P4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18■□□□□ 0.47
COL4A3BPQ9Y5P4 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18■□□□□ 0.47
COL4A3BPQ9Y5P4 AC061975.2-201ENST00000581722 295 ntBASIC18■□□□□ 0.47
COL4A3BPQ9Y5P4 MIR3197-201ENST00000582241 73 ntBASIC18■□□□□ 0.47
COL4A3BPQ9Y5P4 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18■□□□□ 0.47
COL4A3BPQ9Y5P4 AJ011932.1-201ENST00000621707 465 ntBASIC18■□□□□ 0.47
COL4A3BPQ9Y5P4 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL4A3BPQ9Y5P4 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18■□□□□ 0.47
COL4A3BPQ9Y5P4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL4A3BPQ9Y5P4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
COL4A3BPQ9Y5P4 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
COL4A3BPQ9Y5P4 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL4A3BPQ9Y5P4 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL4A3BPQ9Y5P4 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18■□□□□ 0.47
COL4A3BPQ9Y5P4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL4A3BPQ9Y5P4 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18■□□□□ 0.47
COL4A3BPQ9Y5P4 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
COL4A3BPQ9Y5P4 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL4A3BPQ9Y5P4 CICP6-201ENST00000457191 2729 ntBASIC18■□□□□ 0.47
COL4A3BPQ9Y5P4 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
COL4A3BPQ9Y5P4 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL4A3BPQ9Y5P4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.99■□□□□ 0.47
COL4A3BPQ9Y5P4 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL4A3BPQ9Y5P4 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.99■□□□□ 0.47
COL4A3BPQ9Y5P4 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL4A3BPQ9Y5P4 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.99■□□□□ 0.47
COL4A3BPQ9Y5P4 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COL4A3BPQ9Y5P4 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.99■□□□□ 0.47
COL4A3BPQ9Y5P4 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL4A3BPQ9Y5P4 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL4A3BPQ9Y5P4 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.99■□□□□ 0.47
COL4A3BPQ9Y5P4 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL4A3BPQ9Y5P4 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.99■□□□□ 0.47
COL4A3BPQ9Y5P4 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL4A3BPQ9Y5P4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL4A3BPQ9Y5P4 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.99■□□□□ 0.47
COL4A3BPQ9Y5P4 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.99■□□□□ 0.47
COL4A3BPQ9Y5P4 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.99■□□□□ 0.47
COL4A3BPQ9Y5P4 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COL4A3BPQ9Y5P4 AC027369.6-201ENST00000525520 931 ntBASIC17.99■□□□□ 0.47
COL4A3BPQ9Y5P4 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.99■□□□□ 0.47
COL4A3BPQ9Y5P4 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.99■□□□□ 0.47
COL4A3BPQ9Y5P4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.99■□□□□ 0.47
COL4A3BPQ9Y5P4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COL4A3BPQ9Y5P4 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.99■□□□□ 0.47
COL4A3BPQ9Y5P4 AL138828.2-201ENST00000615812 383 ntBASIC17.99■□□□□ 0.47
COL4A3BPQ9Y5P4 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.99■□□□□ 0.47
COL4A3BPQ9Y5P4 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COL4A3BPQ9Y5P4 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL4A3BPQ9Y5P4 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
COL4A3BPQ9Y5P4 AC010491.1-201ENST00000563101 2797 ntBASIC17.99■□□□□ 0.47
COL4A3BPQ9Y5P4 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL4A3BPQ9Y5P4 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL4A3BPQ9Y5P4 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL4A3BPQ9Y5P4 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL4A3BPQ9Y5P4 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.99■□□□□ 0.47
COL4A3BPQ9Y5P4 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.99■□□□□ 0.47
COL4A3BPQ9Y5P4 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL4A3BPQ9Y5P4 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL4A3BPQ9Y5P4 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL4A3BPQ9Y5P4 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL4A3BPQ9Y5P4 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 AC046158.3-201ENST00000624947 2558 ntBASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
COL4A3BPQ9Y5P4 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms