Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
KCNIP3Q9Y2W7 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
KCNIP3Q9Y2W7 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
KCNIP3Q9Y2W7 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 AL009178.2-201ENST00000597278 2719 ntBASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 RBSN-204ENST00000449050 903 ntTSL 2 BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 AC012306.2-201ENST00000609350 630 ntBASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 REXO1L3P-201ENST00000622202 1288 ntBASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
KCNIP3Q9Y2W7 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 AL596275.1-201ENST00000423464 877 ntBASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 AC087163.2-201ENST00000457299 853 ntBASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 AC022616.7-201ENST00000525383 220 ntBASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms