Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 MIR8072-201ENST00000614241 80 ntBASIC21.82■■□□□ 1.08
NINLQ9Y2I6 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC21.82■■□□□ 1.08
NINLQ9Y2I6 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NINLQ9Y2I6 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
NINLQ9Y2I6 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
NINLQ9Y2I6 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
NINLQ9Y2I6 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NINLQ9Y2I6 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NINLQ9Y2I6 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC21.81■■□□□ 1.08
NINLQ9Y2I6 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
NINLQ9Y2I6 SP100-205ENST00000409824 1802 ntTSL 5 BASIC21.81■■□□□ 1.08
NINLQ9Y2I6 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC21.81■■□□□ 1.08
NINLQ9Y2I6 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
NINLQ9Y2I6 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC21.81■■□□□ 1.08
NINLQ9Y2I6 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
NINLQ9Y2I6 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
NINLQ9Y2I6 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
NINLQ9Y2I6 RN7SL837P-201ENST00000463010 287 ntBASIC21.81■■□□□ 1.08
NINLQ9Y2I6 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC21.81■■□□□ 1.08
NINLQ9Y2I6 GLI4-203ENST00000517468 963 ntTSL 5 BASIC21.81■■□□□ 1.08
NINLQ9Y2I6 NEU3-203ENST00000529024 581 ntTSL 3 BASIC21.81■■□□□ 1.08
NINLQ9Y2I6 CMC2-214ENST00000565925 640 ntTSL 5 BASIC21.81■■□□□ 1.08
NINLQ9Y2I6 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC21.81■■□□□ 1.08
NINLQ9Y2I6 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
NINLQ9Y2I6 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC21.81■■□□□ 1.08
NINLQ9Y2I6 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
NINLQ9Y2I6 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
NINLQ9Y2I6 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NINLQ9Y2I6 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
NINLQ9Y2I6 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
NINLQ9Y2I6 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC21.8■■□□□ 1.08
NINLQ9Y2I6 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
NINLQ9Y2I6 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NINLQ9Y2I6 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
NINLQ9Y2I6 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
NINLQ9Y2I6 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
NINLQ9Y2I6 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC21.8■■□□□ 1.08
NINLQ9Y2I6 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
NINLQ9Y2I6 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NINLQ9Y2I6 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
NINLQ9Y2I6 KRT18P64-201ENST00000434946 1219 ntBASIC21.8■■□□□ 1.08
NINLQ9Y2I6 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NINLQ9Y2I6 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC21.8■■□□□ 1.08
NINLQ9Y2I6 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC21.8■■□□□ 1.08
NINLQ9Y2I6 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC21.8■■□□□ 1.08
NINLQ9Y2I6 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC21.8■■□□□ 1.08
NINLQ9Y2I6 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC21.8■■□□□ 1.08
NINLQ9Y2I6 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NINLQ9Y2I6 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NINLQ9Y2I6 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
NINLQ9Y2I6 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NINLQ9Y2I6 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
NINLQ9Y2I6 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NINLQ9Y2I6 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC21.8■■□□□ 1.08
NINLQ9Y2I6 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NINLQ9Y2I6 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC21.8■■□□□ 1.08
NINLQ9Y2I6 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
NINLQ9Y2I6 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
NINLQ9Y2I6 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NINLQ9Y2I6 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC21.79■■□□□ 1.08
NINLQ9Y2I6 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC21.79■■□□□ 1.08
NINLQ9Y2I6 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
NINLQ9Y2I6 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NINLQ9Y2I6 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NINLQ9Y2I6 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
NINLQ9Y2I6 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NINLQ9Y2I6 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NINLQ9Y2I6 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NINLQ9Y2I6 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NINLQ9Y2I6 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
NINLQ9Y2I6 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
NINLQ9Y2I6 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NINLQ9Y2I6 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
NINLQ9Y2I6 AC092933.1-201ENST00000393644 945 ntBASIC21.79■■□□□ 1.08
NINLQ9Y2I6 RAC2-202ENST00000401529 569 ntTSL 4 BASIC21.79■■□□□ 1.08
NINLQ9Y2I6 AC104596.2-201ENST00000512793 793 ntBASIC21.79■■□□□ 1.08
NINLQ9Y2I6 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC21.79■■□□□ 1.08
NINLQ9Y2I6 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
NINLQ9Y2I6 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC21.79■■□□□ 1.08
NINLQ9Y2I6 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC21.79■■□□□ 1.08
NINLQ9Y2I6 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC21.79■■□□□ 1.08
NINLQ9Y2I6 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC21.79■■□□□ 1.08
NINLQ9Y2I6 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NINLQ9Y2I6 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NINLQ9Y2I6 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NINLQ9Y2I6 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
NINLQ9Y2I6 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NINLQ9Y2I6 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NINLQ9Y2I6 CLK3P2-201ENST00000427566 1453 ntBASIC21.79■■□□□ 1.08
NINLQ9Y2I6 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
NINLQ9Y2I6 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NINLQ9Y2I6 AMT-232ENST00000636199 1546 ntTSL 5 BASIC21.78■■□□□ 1.08
NINLQ9Y2I6 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NINLQ9Y2I6 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NINLQ9Y2I6 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC21.78■■□□□ 1.08
NINLQ9Y2I6 KRT18P43-201ENST00000469825 1281 ntBASIC21.78■■□□□ 1.08
NINLQ9Y2I6 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC21.78■■□□□ 1.08
NINLQ9Y2I6 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC21.78■■□□□ 1.08
NINLQ9Y2I6 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC21.78■■□□□ 1.08
NINLQ9Y2I6 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms