Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.52■□□□□ 0.24
FNDC3AQ9Y2H6 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.52■□□□□ 0.24
FNDC3AQ9Y2H6 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
FNDC3AQ9Y2H6 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
FNDC3AQ9Y2H6 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
FNDC3AQ9Y2H6 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
FNDC3AQ9Y2H6 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
FNDC3AQ9Y2H6 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.52■□□□□ 0.24
FNDC3AQ9Y2H6 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.52■□□□□ 0.24
FNDC3AQ9Y2H6 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
FNDC3AQ9Y2H6 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.52■□□□□ 0.24
FNDC3AQ9Y2H6 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
FNDC3AQ9Y2H6 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
FNDC3AQ9Y2H6 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.52■□□□□ 0.24
FNDC3AQ9Y2H6 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
FNDC3AQ9Y2H6 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.52■□□□□ 0.24
FNDC3AQ9Y2H6 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
FNDC3AQ9Y2H6 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.52■□□□□ 0.24
FNDC3AQ9Y2H6 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
FNDC3AQ9Y2H6 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.52■□□□□ 0.24
FNDC3AQ9Y2H6 AC092580.3-201ENST00000430932 139 ntBASIC16.52■□□□□ 0.24
FNDC3AQ9Y2H6 AP005018.1-201ENST00000525475 301 ntBASIC16.52■□□□□ 0.24
FNDC3AQ9Y2H6 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.52■□□□□ 0.24
FNDC3AQ9Y2H6 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.52■□□□□ 0.24
FNDC3AQ9Y2H6 AP000842.3-202ENST00000569238 1080 ntBASIC16.52■□□□□ 0.24
FNDC3AQ9Y2H6 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.52■□□□□ 0.24
FNDC3AQ9Y2H6 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
FNDC3AQ9Y2H6 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
FNDC3AQ9Y2H6 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
FNDC3AQ9Y2H6 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
FNDC3AQ9Y2H6 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
FNDC3AQ9Y2H6 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.52■□□□□ 0.23
FNDC3AQ9Y2H6 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
FNDC3AQ9Y2H6 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
FNDC3AQ9Y2H6 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.23
FNDC3AQ9Y2H6 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.51■□□□□ 0.23
FNDC3AQ9Y2H6 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FNDC3AQ9Y2H6 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.51■□□□□ 0.23
FNDC3AQ9Y2H6 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FNDC3AQ9Y2H6 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.51■□□□□ 0.23
FNDC3AQ9Y2H6 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
FNDC3AQ9Y2H6 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FNDC3AQ9Y2H6 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FNDC3AQ9Y2H6 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.51■□□□□ 0.23
FNDC3AQ9Y2H6 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FNDC3AQ9Y2H6 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
FNDC3AQ9Y2H6 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
FNDC3AQ9Y2H6 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FNDC3AQ9Y2H6 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FNDC3AQ9Y2H6 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
FNDC3AQ9Y2H6 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
FNDC3AQ9Y2H6 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.51■□□□□ 0.23
FNDC3AQ9Y2H6 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.51■□□□□ 0.23
FNDC3AQ9Y2H6 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.51■□□□□ 0.23
FNDC3AQ9Y2H6 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.51■□□□□ 0.23
FNDC3AQ9Y2H6 KRT18P34-201ENST00000488218 1270 ntBASIC16.51■□□□□ 0.23
FNDC3AQ9Y2H6 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.51■□□□□ 0.23
FNDC3AQ9Y2H6 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.51■□□□□ 0.23
FNDC3AQ9Y2H6 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.51■□□□□ 0.23
FNDC3AQ9Y2H6 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.51■□□□□ 0.23
FNDC3AQ9Y2H6 AC008267.7-201ENST00000624570 1194 ntBASIC16.51■□□□□ 0.23
FNDC3AQ9Y2H6 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
FNDC3AQ9Y2H6 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
FNDC3AQ9Y2H6 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FNDC3AQ9Y2H6 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FNDC3AQ9Y2H6 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FNDC3AQ9Y2H6 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
FNDC3AQ9Y2H6 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FNDC3AQ9Y2H6 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FNDC3AQ9Y2H6 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 CRB3P1-201ENST00000449338 276 ntBASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 MIR3909-201ENST00000579518 119 ntBASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms