Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CLIP2Q9UDT6 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CLIP2Q9UDT6 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLIP2Q9UDT6 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.11■□□□□ 0.65
CLIP2Q9UDT6 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CLIP2Q9UDT6 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 BANP-201ENST00000286122 2368 ntTSL 5 BASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 HLA-V-204ENST00000476601 1289 ntBASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 AC004890.2-204ENST00000481968 304 ntBASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 AC138761.1-201ENST00000584393 385 ntBASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 AL589739.1-201ENST00000607720 493 ntBASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 AL133215.2-201ENST00000609242 977 ntBASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 STK24-203ENST00000397517 4578 ntTSL 2 BASIC19.1■□□□□ 0.65
CLIP2Q9UDT6 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CLIP2Q9UDT6 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIP2Q9UDT6 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIP2Q9UDT6 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CLIP2Q9UDT6 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.09■□□□□ 0.65
CLIP2Q9UDT6 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIP2Q9UDT6 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIP2Q9UDT6 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLIP2Q9UDT6 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIP2Q9UDT6 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CLIP2Q9UDT6 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIP2Q9UDT6 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.09■□□□□ 0.65
CLIP2Q9UDT6 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIP2Q9UDT6 MIR661-201ENST00000384842 89 ntBASIC19.09■□□□□ 0.65
CLIP2Q9UDT6 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CLIP2Q9UDT6 AC236430.1-201ENST00000402231 743 ntBASIC19.09■□□□□ 0.65
CLIP2Q9UDT6 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLIP2Q9UDT6 RPL37AP1-201ENST00000412502 279 ntBASIC19.09■□□□□ 0.65
CLIP2Q9UDT6 TSSK5P-201ENST00000423978 907 ntBASIC19.09■□□□□ 0.65
CLIP2Q9UDT6 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC19.09■□□□□ 0.65
CLIP2Q9UDT6 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIP2Q9UDT6 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC19.09■□□□□ 0.65
CLIP2Q9UDT6 MPI-209ENST00000564003 1195 ntTSL 2 BASIC19.09■□□□□ 0.65
CLIP2Q9UDT6 RN7SL204P-201ENST00000582831 262 ntBASIC19.09■□□□□ 0.65
CLIP2Q9UDT6 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC19.09■□□□□ 0.65
CLIP2Q9UDT6 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLIP2Q9UDT6 ANKRD26P3-201ENST00000454044 2748 ntBASIC19.09■□□□□ 0.65
CLIP2Q9UDT6 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLIP2Q9UDT6 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIP2Q9UDT6 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLIP2Q9UDT6 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC19.09■□□□□ 0.65
CLIP2Q9UDT6 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC19.09■□□□□ 0.65
CLIP2Q9UDT6 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLIP2Q9UDT6 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC19.09■□□□□ 0.65
CLIP2Q9UDT6 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CLIP2Q9UDT6 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
CLIP2Q9UDT6 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19.08■□□□□ 0.65
CLIP2Q9UDT6 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLIP2Q9UDT6 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC19.08■□□□□ 0.65
CLIP2Q9UDT6 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CLIP2Q9UDT6 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC19.08■□□□□ 0.65
CLIP2Q9UDT6 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
CLIP2Q9UDT6 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
CLIP2Q9UDT6 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLIP2Q9UDT6 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
CLIP2Q9UDT6 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CLIP2Q9UDT6 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLIP2Q9UDT6 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms