Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TRMT13Q9NUP7 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRMT13Q9NUP7 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRMT13Q9NUP7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRMT13Q9NUP7 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRMT13Q9NUP7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
TRMT13Q9NUP7 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRMT13Q9NUP7 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRMT13Q9NUP7 AC005052.1-201ENST00000625181 2492 ntBASIC17.52■□□□□ 0.4
TRMT13Q9NUP7 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRMT13Q9NUP7 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TRMT13Q9NUP7 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
TRMT13Q9NUP7 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.52■□□□□ 0.4
TRMT13Q9NUP7 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRMT13Q9NUP7 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.52■□□□□ 0.4
TRMT13Q9NUP7 FAM21FP-201ENST00000426241 1131 ntBASIC17.52■□□□□ 0.4
TRMT13Q9NUP7 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.52■□□□□ 0.4
TRMT13Q9NUP7 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRMT13Q9NUP7 VDAC1P7-201ENST00000462417 847 ntBASIC17.52■□□□□ 0.4
TRMT13Q9NUP7 AC108725.1-201ENST00000495472 409 ntBASIC17.52■□□□□ 0.4
TRMT13Q9NUP7 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.52■□□□□ 0.4
TRMT13Q9NUP7 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.52■□□□□ 0.4
TRMT13Q9NUP7 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.52■□□□□ 0.4
TRMT13Q9NUP7 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.52■□□□□ 0.4
TRMT13Q9NUP7 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRMT13Q9NUP7 AP000812.2-201ENST00000538934 718 ntBASIC17.52■□□□□ 0.4
TRMT13Q9NUP7 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.52■□□□□ 0.4
TRMT13Q9NUP7 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.52■□□□□ 0.4
TRMT13Q9NUP7 AC120045.2-201ENST00000567334 178 ntBASIC17.52■□□□□ 0.4
TRMT13Q9NUP7 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.52■□□□□ 0.4
TRMT13Q9NUP7 CLUHP6-201ENST00000580789 941 ntBASIC17.52■□□□□ 0.4
TRMT13Q9NUP7 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.52■□□□□ 0.4
TRMT13Q9NUP7 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRMT13Q9NUP7 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.52■□□□□ 0.4
TRMT13Q9NUP7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.52■□□□□ 0.4
TRMT13Q9NUP7 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRMT13Q9NUP7 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
TRMT13Q9NUP7 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.52■□□□□ 0.4
TRMT13Q9NUP7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRMT13Q9NUP7 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRMT13Q9NUP7 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRMT13Q9NUP7 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
TRMT13Q9NUP7 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRMT13Q9NUP7 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.52■□□□□ 0.39
TRMT13Q9NUP7 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.39
TRMT13Q9NUP7 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.39
TRMT13Q9NUP7 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRMT13Q9NUP7 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRMT13Q9NUP7 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.52■□□□□ 0.39
TRMT13Q9NUP7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRMT13Q9NUP7 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRMT13Q9NUP7 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.52■□□□□ 0.39
TRMT13Q9NUP7 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.52■□□□□ 0.39
TRMT13Q9NUP7 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.51■□□□□ 0.39
TRMT13Q9NUP7 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
TRMT13Q9NUP7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRMT13Q9NUP7 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRMT13Q9NUP7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TRMT13Q9NUP7 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.51■□□□□ 0.39
TRMT13Q9NUP7 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.51■□□□□ 0.39
TRMT13Q9NUP7 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRMT13Q9NUP7 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRMT13Q9NUP7 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRMT13Q9NUP7 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRMT13Q9NUP7 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRMT13Q9NUP7 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRMT13Q9NUP7 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRMT13Q9NUP7 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.51■□□□□ 0.39
TRMT13Q9NUP7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TRMT13Q9NUP7 C1QBPP1-201ENST00000400117 770 ntBASIC17.51■□□□□ 0.39
TRMT13Q9NUP7 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRMT13Q9NUP7 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.51■□□□□ 0.39
TRMT13Q9NUP7 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRMT13Q9NUP7 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.51■□□□□ 0.39
TRMT13Q9NUP7 AL355864.2-201ENST00000447420 863 ntBASIC17.51■□□□□ 0.39
TRMT13Q9NUP7 FTH1P14-201ENST00000482930 551 ntBASIC17.51■□□□□ 0.39
TRMT13Q9NUP7 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.51■□□□□ 0.39
TRMT13Q9NUP7 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.51■□□□□ 0.39
TRMT13Q9NUP7 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.51■□□□□ 0.39
TRMT13Q9NUP7 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRMT13Q9NUP7 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.51■□□□□ 0.39
TRMT13Q9NUP7 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.51■□□□□ 0.39
TRMT13Q9NUP7 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.51■□□□□ 0.39
TRMT13Q9NUP7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRMT13Q9NUP7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRMT13Q9NUP7 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRMT13Q9NUP7 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.51■□□□□ 0.39
TRMT13Q9NUP7 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRMT13Q9NUP7 AC020907.1-201ENST00000616460 1350 ntBASIC17.51■□□□□ 0.39
TRMT13Q9NUP7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.51■□□□□ 0.39
TRMT13Q9NUP7 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRMT13Q9NUP7 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.51■□□□□ 0.39
TRMT13Q9NUP7 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRMT13Q9NUP7 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRMT13Q9NUP7 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.51■□□□□ 0.39
TRMT13Q9NUP7 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.5■□□□□ 0.39
TRMT13Q9NUP7 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.5■□□□□ 0.39
TRMT13Q9NUP7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.5■□□□□ 0.39
TRMT13Q9NUP7 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRMT13Q9NUP7 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms