Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM7Q9NR12 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDLIM7Q9NR12 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDLIM7Q9NR12 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDLIM7Q9NR12 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDLIM7Q9NR12 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDLIM7Q9NR12 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PDLIM7Q9NR12 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDLIM7Q9NR12 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PDLIM7Q9NR12 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDLIM7Q9NR12 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.85■□□□□ 0.45
PDLIM7Q9NR12 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
PDLIM7Q9NR12 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PDLIM7Q9NR12 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PDLIM7Q9NR12 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.85■□□□□ 0.45
PDLIM7Q9NR12 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.85■□□□□ 0.45
PDLIM7Q9NR12 EEF1DP4-201ENST00000446006 880 ntBASIC17.85■□□□□ 0.45
PDLIM7Q9NR12 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDLIM7Q9NR12 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.85■□□□□ 0.45
PDLIM7Q9NR12 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PDLIM7Q9NR12 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.85■□□□□ 0.45
PDLIM7Q9NR12 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDLIM7Q9NR12 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.85■□□□□ 0.45
PDLIM7Q9NR12 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PDLIM7Q9NR12 BCL2-203ENST00000589955 5011 ntBASIC17.85■□□□□ 0.45
PDLIM7Q9NR12 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.85■□□□□ 0.45
PDLIM7Q9NR12 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDLIM7Q9NR12 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDLIM7Q9NR12 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
PDLIM7Q9NR12 AL118508.1-201ENST00000613502 2345 ntBASIC17.84■□□□□ 0.45
PDLIM7Q9NR12 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PDLIM7Q9NR12 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDLIM7Q9NR12 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDLIM7Q9NR12 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.84■□□□□ 0.45
PDLIM7Q9NR12 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.84■□□□□ 0.45
PDLIM7Q9NR12 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.84■□□□□ 0.45
PDLIM7Q9NR12 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.84■□□□□ 0.45
PDLIM7Q9NR12 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PDLIM7Q9NR12 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PDLIM7Q9NR12 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDLIM7Q9NR12 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PDLIM7Q9NR12 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDLIM7Q9NR12 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDLIM7Q9NR12 AC004987.2-201ENST00000395959 1148 ntBASIC17.84■□□□□ 0.45
PDLIM7Q9NR12 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDLIM7Q9NR12 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.84■□□□□ 0.45
PDLIM7Q9NR12 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.84■□□□□ 0.45
PDLIM7Q9NR12 CSF2RBP1-201ENST00000447905 391 ntBASIC17.84■□□□□ 0.45
PDLIM7Q9NR12 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.84■□□□□ 0.45
PDLIM7Q9NR12 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.84■□□□□ 0.45
PDLIM7Q9NR12 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.84■□□□□ 0.45
PDLIM7Q9NR12 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
PDLIM7Q9NR12 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.84■□□□□ 0.45
PDLIM7Q9NR12 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.84■□□□□ 0.45
PDLIM7Q9NR12 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.84■□□□□ 0.45
PDLIM7Q9NR12 MIR5189-201ENST00000577370 114 ntBASIC17.84■□□□□ 0.45
PDLIM7Q9NR12 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PDLIM7Q9NR12 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.84■□□□□ 0.45
PDLIM7Q9NR12 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PDLIM7Q9NR12 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PDLIM7Q9NR12 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PDLIM7Q9NR12 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDLIM7Q9NR12 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PDLIM7Q9NR12 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDLIM7Q9NR12 AL596087.1-201ENST00000400979 1969 ntBASIC17.84■□□□□ 0.45
PDLIM7Q9NR12 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
PDLIM7Q9NR12 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PDLIM7Q9NR12 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.84■□□□□ 0.45
PDLIM7Q9NR12 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.84■□□□□ 0.45
PDLIM7Q9NR12 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
PDLIM7Q9NR12 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PDLIM7Q9NR12 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PDLIM7Q9NR12 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
PDLIM7Q9NR12 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
PDLIM7Q9NR12 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDLIM7Q9NR12 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.83■□□□□ 0.44
PDLIM7Q9NR12 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PDLIM7Q9NR12 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.83■□□□□ 0.44
PDLIM7Q9NR12 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PDLIM7Q9NR12 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.83■□□□□ 0.44
PDLIM7Q9NR12 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.83■□□□□ 0.44
PDLIM7Q9NR12 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.83■□□□□ 0.44
PDLIM7Q9NR12 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
PDLIM7Q9NR12 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDLIM7Q9NR12 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PDLIM7Q9NR12 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.83■□□□□ 0.44
PDLIM7Q9NR12 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
PDLIM7Q9NR12 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PDLIM7Q9NR12 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.83■□□□□ 0.44
PDLIM7Q9NR12 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDLIM7Q9NR12 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDLIM7Q9NR12 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PDLIM7Q9NR12 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
PDLIM7Q9NR12 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDLIM7Q9NR12 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDLIM7Q9NR12 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PDLIM7Q9NR12 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM7Q9NR12 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms