Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
TRAF4Q9BUZ4 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TRAF4Q9BUZ4 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.47□□□□□ -0.09
TRAF4Q9BUZ4 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.47□□□□□ -0.09
TRAF4Q9BUZ4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.47□□□□□ -0.09
TRAF4Q9BUZ4 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAF4Q9BUZ4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.47□□□□□ -0.09
TRAF4Q9BUZ4 AP002490.2-201ENST00000524791 560 ntBASIC14.47□□□□□ -0.09
TRAF4Q9BUZ4 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.47□□□□□ -0.09
TRAF4Q9BUZ4 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.47□□□□□ -0.09
TRAF4Q9BUZ4 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.47□□□□□ -0.09
TRAF4Q9BUZ4 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.47□□□□□ -0.09
TRAF4Q9BUZ4 AC005412.3-201ENST00000580309 715 ntBASIC14.47□□□□□ -0.09
TRAF4Q9BUZ4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.47□□□□□ -0.09
TRAF4Q9BUZ4 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAF4Q9BUZ4 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAF4Q9BUZ4 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAF4Q9BUZ4 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAF4Q9BUZ4 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAF4Q9BUZ4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
TRAF4Q9BUZ4 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAF4Q9BUZ4 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAF4Q9BUZ4 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAF4Q9BUZ4 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TRAF4Q9BUZ4 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
TRAF4Q9BUZ4 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAF4Q9BUZ4 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAF4Q9BUZ4 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TRAF4Q9BUZ4 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAF4Q9BUZ4 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.47□□□□□ -0.09
TRAF4Q9BUZ4 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.47□□□□□ -0.09
TRAF4Q9BUZ4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.46□□□□□ -0.09
TRAF4Q9BUZ4 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAF4Q9BUZ4 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
TRAF4Q9BUZ4 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
TRAF4Q9BUZ4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAF4Q9BUZ4 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAF4Q9BUZ4 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAF4Q9BUZ4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAF4Q9BUZ4 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAF4Q9BUZ4 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAF4Q9BUZ4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAF4Q9BUZ4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAF4Q9BUZ4 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAF4Q9BUZ4 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAF4Q9BUZ4 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAF4Q9BUZ4 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAF4Q9BUZ4 MIR770-201ENST00000390219 98 ntBASIC14.46□□□□□ -0.09
TRAF4Q9BUZ4 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.46□□□□□ -0.09
TRAF4Q9BUZ4 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.46□□□□□ -0.09
TRAF4Q9BUZ4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAF4Q9BUZ4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.46□□□□□ -0.09
TRAF4Q9BUZ4 AC025678.2-201ENST00000562061 970 ntBASIC14.46□□□□□ -0.09
TRAF4Q9BUZ4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAF4Q9BUZ4 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAF4Q9BUZ4 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAF4Q9BUZ4 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAF4Q9BUZ4 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
TRAF4Q9BUZ4 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAF4Q9BUZ4 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TRAF4Q9BUZ4 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAF4Q9BUZ4 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAF4Q9BUZ4 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAF4Q9BUZ4 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAF4Q9BUZ4 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
TRAF4Q9BUZ4 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAF4Q9BUZ4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.46□□□□□ -0.1
TRAF4Q9BUZ4 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAF4Q9BUZ4 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAF4Q9BUZ4 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAF4Q9BUZ4 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.46□□□□□ -0.1
TRAF4Q9BUZ4 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAF4Q9BUZ4 SPDYE11-202ENST00000450699 704 ntBASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms