Protein–RNA interactions for Protein: Q99956

DUSP9, Dual specificity protein phosphatase 9, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP9Q99956 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DUSP9Q99956 RPS8P6-201ENST00000426177 609 ntBASIC17.65■□□□□ 0.42
DUSP9Q99956 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.65■□□□□ 0.42
DUSP9Q99956 DNAJB3-202ENST00000449667 1266 ntBASIC17.65■□□□□ 0.42
DUSP9Q99956 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.65■□□□□ 0.42
DUSP9Q99956 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.65■□□□□ 0.42
DUSP9Q99956 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DUSP9Q99956 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
DUSP9Q99956 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DUSP9Q99956 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DUSP9Q99956 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
DUSP9Q99956 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.65■□□□□ 0.42
DUSP9Q99956 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DUSP9Q99956 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.65■□□□□ 0.42
DUSP9Q99956 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
DUSP9Q99956 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.65■□□□□ 0.42
DUSP9Q99956 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DUSP9Q99956 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DUSP9Q99956 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DUSP9Q99956 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DUSP9Q99956 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.65■□□□□ 0.42
DUSP9Q99956 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
DUSP9Q99956 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.64■□□□□ 0.42
DUSP9Q99956 AC090616.6-203ENST00000579186 1945 ntBASIC17.64■□□□□ 0.42
DUSP9Q99956 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
DUSP9Q99956 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
DUSP9Q99956 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
DUSP9Q99956 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
DUSP9Q99956 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
DUSP9Q99956 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.64■□□□□ 0.42
DUSP9Q99956 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
DUSP9Q99956 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUSP9Q99956 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.64■□□□□ 0.41
DUSP9Q99956 AC009090.5-201ENST00000624886 2285 ntBASIC17.64■□□□□ 0.41
DUSP9Q99956 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.64■□□□□ 0.41
DUSP9Q99956 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
DUSP9Q99956 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
DUSP9Q99956 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DUSP9Q99956 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
DUSP9Q99956 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUSP9Q99956 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.64■□□□□ 0.41
DUSP9Q99956 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.64■□□□□ 0.41
DUSP9Q99956 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.64■□□□□ 0.41
DUSP9Q99956 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DUSP9Q99956 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.64■□□□□ 0.41
DUSP9Q99956 SPDYE11-202ENST00000450699 704 ntBASIC17.64■□□□□ 0.41
DUSP9Q99956 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.64■□□□□ 0.41
DUSP9Q99956 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.64■□□□□ 0.41
DUSP9Q99956 RN7SL589P-201ENST00000481268 310 ntBASIC17.64■□□□□ 0.41
DUSP9Q99956 RNA5SP410-201ENST00000516285 106 ntBASIC17.64■□□□□ 0.41
DUSP9Q99956 AC243562.2-201ENST00000561247 970 ntBASIC17.64■□□□□ 0.41
DUSP9Q99956 SPDYE9P-201ENST00000570642 692 ntBASIC17.64■□□□□ 0.41
DUSP9Q99956 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.64■□□□□ 0.41
DUSP9Q99956 SPDYE10P-202ENST00000612005 668 ntBASIC17.64■□□□□ 0.41
DUSP9Q99956 SPDYE8P-202ENST00000612377 668 ntBASIC17.64■□□□□ 0.41
DUSP9Q99956 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.64■□□□□ 0.41
DUSP9Q99956 AC084121.4-201ENST00000641598 221 ntBASIC17.64■□□□□ 0.41
DUSP9Q99956 AF228730.8-201ENST00000642140 221 ntBASIC17.64■□□□□ 0.41
DUSP9Q99956 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUSP9Q99956 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.64■□□□□ 0.41
DUSP9Q99956 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUSP9Q99956 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUSP9Q99956 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.64■□□□□ 0.41
DUSP9Q99956 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUSP9Q99956 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.64■□□□□ 0.41
DUSP9Q99956 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DUSP9Q99956 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
DUSP9Q99956 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DUSP9Q99956 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.64■□□□□ 0.41
DUSP9Q99956 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUSP9Q99956 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
DUSP9Q99956 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DUSP9Q99956 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DUSP9Q99956 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.63■□□□□ 0.41
DUSP9Q99956 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
DUSP9Q99956 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.63■□□□□ 0.41
DUSP9Q99956 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DUSP9Q99956 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
DUSP9Q99956 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DUSP9Q99956 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
DUSP9Q99956 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DUSP9Q99956 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.63■□□□□ 0.41
DUSP9Q99956 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.63■□□□□ 0.41
DUSP9Q99956 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DUSP9Q99956 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
DUSP9Q99956 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.63■□□□□ 0.41
DUSP9Q99956 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.63■□□□□ 0.41
DUSP9Q99956 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
DUSP9Q99956 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DUSP9Q99956 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.63■□□□□ 0.41
DUSP9Q99956 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.63■□□□□ 0.41
DUSP9Q99956 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.63■□□□□ 0.41
DUSP9Q99956 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.63■□□□□ 0.41
DUSP9Q99956 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.63■□□□□ 0.41
DUSP9Q99956 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.63■□□□□ 0.41
DUSP9Q99956 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DUSP9Q99956 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DUSP9Q99956 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DUSP9Q99956 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DUSP9Q99956 TMBIM7P-203ENST00000641617 1718 ntBASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms