Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 AC026979.3-201ENST00000607315 403 ntBASIC16.59■□□□□ 0.25
CSPG4P5Q96PW8 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CSPG4P5Q96PW8 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.59■□□□□ 0.25
CSPG4P5Q96PW8 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CSPG4P5Q96PW8 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.59■□□□□ 0.25
CSPG4P5Q96PW8 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSPG4P5Q96PW8 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CSPG4P5Q96PW8 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSPG4P5Q96PW8 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSPG4P5Q96PW8 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSPG4P5Q96PW8 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CSPG4P5Q96PW8 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSPG4P5Q96PW8 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CSPG4P5Q96PW8 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSPG4P5Q96PW8 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.59■□□□□ 0.25
CSPG4P5Q96PW8 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CSPG4P5Q96PW8 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSPG4P5Q96PW8 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.59■□□□□ 0.25
CSPG4P5Q96PW8 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CSPG4P5Q96PW8 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.58■□□□□ 0.25
CSPG4P5Q96PW8 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CSPG4P5Q96PW8 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CSPG4P5Q96PW8 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
CSPG4P5Q96PW8 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CSPG4P5Q96PW8 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CSPG4P5Q96PW8 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CSPG4P5Q96PW8 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.58■□□□□ 0.25
CSPG4P5Q96PW8 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CSPG4P5Q96PW8 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSPG4P5Q96PW8 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CSPG4P5Q96PW8 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CSPG4P5Q96PW8 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSPG4P5Q96PW8 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CSPG4P5Q96PW8 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CSPG4P5Q96PW8 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CSPG4P5Q96PW8 MIR1233-2-201ENST00000408138 82 ntBASIC16.58■□□□□ 0.24
CSPG4P5Q96PW8 MIR1233-1-201ENST00000408722 82 ntBASIC16.58■□□□□ 0.24
CSPG4P5Q96PW8 AL353705.2-201ENST00000428243 662 ntBASIC16.58■□□□□ 0.24
CSPG4P5Q96PW8 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.58■□□□□ 0.24
CSPG4P5Q96PW8 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.58■□□□□ 0.24
CSPG4P5Q96PW8 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.58■□□□□ 0.24
CSPG4P5Q96PW8 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.58■□□□□ 0.24
CSPG4P5Q96PW8 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.58■□□□□ 0.24
CSPG4P5Q96PW8 AL596442.2-201ENST00000610240 980 ntBASIC16.58■□□□□ 0.24
CSPG4P5Q96PW8 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.58■□□□□ 0.24
CSPG4P5Q96PW8 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CSPG4P5Q96PW8 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSPG4P5Q96PW8 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.58■□□□□ 0.24
CSPG4P5Q96PW8 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSPG4P5Q96PW8 AC018892.3-201ENST00000623986 2499 ntBASIC16.58■□□□□ 0.24
CSPG4P5Q96PW8 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSPG4P5Q96PW8 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSPG4P5Q96PW8 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSPG4P5Q96PW8 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CSPG4P5Q96PW8 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.57■□□□□ 0.24
CSPG4P5Q96PW8 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSPG4P5Q96PW8 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CSPG4P5Q96PW8 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CSPG4P5Q96PW8 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSPG4P5Q96PW8 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CSPG4P5Q96PW8 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
CSPG4P5Q96PW8 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSPG4P5Q96PW8 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.57■□□□□ 0.24
CSPG4P5Q96PW8 REXO1L1P-202ENST00000608646 1974 ntBASIC16.57■□□□□ 0.24
CSPG4P5Q96PW8 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.57■□□□□ 0.24
CSPG4P5Q96PW8 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CSPG4P5Q96PW8 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.57■□□□□ 0.24
CSPG4P5Q96PW8 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CSPG4P5Q96PW8 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSPG4P5Q96PW8 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CSPG4P5Q96PW8 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
CSPG4P5Q96PW8 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.57■□□□□ 0.24
CSPG4P5Q96PW8 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CSPG4P5Q96PW8 DNAJB3-202ENST00000449667 1266 ntBASIC16.57■□□□□ 0.24
CSPG4P5Q96PW8 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.57■□□□□ 0.24
CSPG4P5Q96PW8 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CSPG4P5Q96PW8 SNHG9-202ENST00000564014 471 ntBASIC16.57■□□□□ 0.24
CSPG4P5Q96PW8 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.57■□□□□ 0.24
CSPG4P5Q96PW8 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.57■□□□□ 0.24
CSPG4P5Q96PW8 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSPG4P5Q96PW8 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSPG4P5Q96PW8 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CSPG4P5Q96PW8 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CSPG4P5Q96PW8 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSPG4P5Q96PW8 AL162727.3-201ENST00000635661 2787 ntBASIC16.57■□□□□ 0.24
CSPG4P5Q96PW8 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.57■□□□□ 0.24
CSPG4P5Q96PW8 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSPG4P5Q96PW8 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.57■□□□□ 0.24
CSPG4P5Q96PW8 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CSPG4P5Q96PW8 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSPG4P5Q96PW8 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSPG4P5Q96PW8 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSPG4P5Q96PW8 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.56■□□□□ 0.24
CSPG4P5Q96PW8 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CSPG4P5Q96PW8 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.56■□□□□ 0.24
CSPG4P5Q96PW8 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.56■□□□□ 0.24
CSPG4P5Q96PW8 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CSPG4P5Q96PW8 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.56■□□□□ 0.24
CSPG4P5Q96PW8 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSPG4P5Q96PW8 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms