Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM43Q96BQ3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM43Q96BQ3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TRIM43Q96BQ3 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM43Q96BQ3 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM43Q96BQ3 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM43Q96BQ3 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TRIM43Q96BQ3 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM43Q96BQ3 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM43Q96BQ3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TRIM43Q96BQ3 AC060834.1-201ENST00000443027 2032 ntBASIC17.25■□□□□ 0.35
TRIM43Q96BQ3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM43Q96BQ3 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM43Q96BQ3 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM43Q96BQ3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM43Q96BQ3 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
TRIM43Q96BQ3 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM43Q96BQ3 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM43Q96BQ3 AC245100.5-201ENST00000452108 331 ntBASIC17.25■□□□□ 0.35
TRIM43Q96BQ3 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM43Q96BQ3 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.25■□□□□ 0.35
TRIM43Q96BQ3 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM43Q96BQ3 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TRIM43Q96BQ3 AC093813.1-201ENST00000605066 256 ntBASIC17.25■□□□□ 0.35
TRIM43Q96BQ3 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM43Q96BQ3 AC138627.1-207ENST00000641560 1006 ntBASIC17.25■□□□□ 0.35
TRIM43Q96BQ3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM43Q96BQ3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM43Q96BQ3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TRIM43Q96BQ3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM43Q96BQ3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM43Q96BQ3 AL138709.1-201ENST00000614840 1693 ntBASIC17.25■□□□□ 0.35
TRIM43Q96BQ3 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM43Q96BQ3 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM43Q96BQ3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM43Q96BQ3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TRIM43Q96BQ3 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM43Q96BQ3 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM43Q96BQ3 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 AL590640.2-201ENST00000457038 527 ntBASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 PHKG1P2-201ENST00000457537 863 ntBASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 MIR5572-201ENST00000583188 137 ntBASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 EEF1DP1-201ENST00000585891 896 ntBASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 AL451050.2-201ENST00000606967 682 ntBASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 AC132938.4-201ENST00000623835 848 ntBASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM43Q96BQ3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 AL592424.1-201ENST00000563624 1536 ntBASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRIM43Q96BQ3 AC136604.1-201ENST00000418535 575 ntBASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms