Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.51□□□□□ -0.09
PTP4A1Q93096 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
PTP4A1Q93096 AC109635.5-201ENST00000533593 962 ntBASIC14.51□□□□□ -0.09
PTP4A1Q93096 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.51□□□□□ -0.09
PTP4A1Q93096 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.51□□□□□ -0.09
PTP4A1Q93096 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.51□□□□□ -0.09
PTP4A1Q93096 AL009183.1-201ENST00000603760 355 ntBASIC14.51□□□□□ -0.09
PTP4A1Q93096 AL365330.1-201ENST00000607459 531 ntBASIC14.51□□□□□ -0.09
PTP4A1Q93096 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.51□□□□□ -0.09
PTP4A1Q93096 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTP4A1Q93096 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.51□□□□□ -0.09
PTP4A1Q93096 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.51□□□□□ -0.09
PTP4A1Q93096 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTP4A1Q93096 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.51□□□□□ -0.09
PTP4A1Q93096 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
PTP4A1Q93096 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
PTP4A1Q93096 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
PTP4A1Q93096 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.51□□□□□ -0.09
PTP4A1Q93096 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PTP4A1Q93096 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTP4A1Q93096 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTP4A1Q93096 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTP4A1Q93096 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTP4A1Q93096 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
PTP4A1Q93096 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTP4A1Q93096 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTP4A1Q93096 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PTP4A1Q93096 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTP4A1Q93096 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PTP4A1Q93096 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PTP4A1Q93096 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.51□□□□□ -0.09
PTP4A1Q93096 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTP4A1Q93096 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTP4A1Q93096 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTP4A1Q93096 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTP4A1Q93096 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
PTP4A1Q93096 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PTP4A1Q93096 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTP4A1Q93096 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTP4A1Q93096 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTP4A1Q93096 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
PTP4A1Q93096 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.5□□□□□ -0.09
PTP4A1Q93096 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.5□□□□□ -0.09
PTP4A1Q93096 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
PTP4A1Q93096 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTP4A1Q93096 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTP4A1Q93096 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTP4A1Q93096 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTP4A1Q93096 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.5□□□□□ -0.09
PTP4A1Q93096 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.5□□□□□ -0.09
PTP4A1Q93096 AC245100.5-201ENST00000452108 331 ntBASIC14.5□□□□□ -0.09
PTP4A1Q93096 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.5□□□□□ -0.09
PTP4A1Q93096 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.5□□□□□ -0.09
PTP4A1Q93096 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.5□□□□□ -0.09
PTP4A1Q93096 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.5□□□□□ -0.09
PTP4A1Q93096 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTP4A1Q93096 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.5□□□□□ -0.09
PTP4A1Q93096 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.5□□□□□ -0.09
PTP4A1Q93096 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.5□□□□□ -0.09
PTP4A1Q93096 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
PTP4A1Q93096 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.5□□□□□ -0.09
PTP4A1Q93096 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTP4A1Q93096 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
PTP4A1Q93096 AC120114.3-201ENST00000611923 658 ntBASIC14.5□□□□□ -0.09
PTP4A1Q93096 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.5□□□□□ -0.09
PTP4A1Q93096 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PTP4A1Q93096 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTP4A1Q93096 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTP4A1Q93096 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.5□□□□□ -0.09
PTP4A1Q93096 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.5□□□□□ -0.09
PTP4A1Q93096 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
PTP4A1Q93096 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PTP4A1Q93096 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTP4A1Q93096 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTP4A1Q93096 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTP4A1Q93096 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.5□□□□□ -0.09
PTP4A1Q93096 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTP4A1Q93096 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.5□□□□□ -0.09
PTP4A1Q93096 AL589702.1-201ENST00000641229 1509 ntBASIC14.5□□□□□ -0.09
PTP4A1Q93096 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTP4A1Q93096 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTP4A1Q93096 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTP4A1Q93096 AL109954.1-202ENST00000564051 2148 ntBASIC14.5□□□□□ -0.09
PTP4A1Q93096 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.5□□□□□ -0.09
PTP4A1Q93096 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTP4A1Q93096 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.49□□□□□ -0.09
PTP4A1Q93096 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTP4A1Q93096 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.49□□□□□ -0.09
PTP4A1Q93096 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTP4A1Q93096 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.49□□□□□ -0.09
PTP4A1Q93096 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTP4A1Q93096 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTP4A1Q93096 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
PTP4A1Q93096 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.49□□□□□ -0.09
PTP4A1Q93096 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTP4A1Q93096 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTP4A1Q93096 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTP4A1Q93096 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
PTP4A1Q93096 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.49□□□□□ -0.09
PTP4A1Q93096 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms