Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 HAUS4P1-201ENST00000406739 1145 ntBASIC18.1■□□□□ 0.49
USP6NLQ92738 KRT18P64-201ENST00000434946 1219 ntBASIC18.1■□□□□ 0.49
USP6NLQ92738 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC18.1■□□□□ 0.49
USP6NLQ92738 AC245100.5-201ENST00000452108 331 ntBASIC18.1■□□□□ 0.49
USP6NLQ92738 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC18.1■□□□□ 0.49
USP6NLQ92738 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP6NLQ92738 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
USP6NLQ92738 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.1■□□□□ 0.49
USP6NLQ92738 AC243562.2-201ENST00000561247 970 ntBASIC18.1■□□□□ 0.49
USP6NLQ92738 AC103810.3-201ENST00000583567 96 ntBASIC18.1■□□□□ 0.49
USP6NLQ92738 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP6NLQ92738 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP6NLQ92738 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
USP6NLQ92738 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP6NLQ92738 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.1■□□□□ 0.49
USP6NLQ92738 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP6NLQ92738 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.1■□□□□ 0.49
USP6NLQ92738 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP6NLQ92738 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
USP6NLQ92738 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP6NLQ92738 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.1■□□□□ 0.49
USP6NLQ92738 PRORSD1P-202ENST00000563365 2154 ntBASIC18.1■□□□□ 0.49
USP6NLQ92738 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP6NLQ92738 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
USP6NLQ92738 INTS4P2-202ENST00000614726 2019 ntBASIC18.1■□□□□ 0.49
USP6NLQ92738 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.1■□□□□ 0.49
USP6NLQ92738 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP6NLQ92738 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.09■□□□□ 0.49
USP6NLQ92738 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
USP6NLQ92738 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP6NLQ92738 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP6NLQ92738 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP6NLQ92738 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
USP6NLQ92738 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.09■□□□□ 0.49
USP6NLQ92738 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP6NLQ92738 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP6NLQ92738 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP6NLQ92738 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
USP6NLQ92738 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP6NLQ92738 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18.09■□□□□ 0.49
USP6NLQ92738 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP6NLQ92738 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP6NLQ92738 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP6NLQ92738 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP6NLQ92738 ZNF767P-206ENST00000513792 565 ntBASIC18.09■□□□□ 0.49
USP6NLQ92738 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC18.09■□□□□ 0.49
USP6NLQ92738 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC18.09■□□□□ 0.49
USP6NLQ92738 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC18.09■□□□□ 0.49
USP6NLQ92738 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.09■□□□□ 0.49
USP6NLQ92738 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.09■□□□□ 0.49
USP6NLQ92738 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP6NLQ92738 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP6NLQ92738 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP6NLQ92738 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP6NLQ92738 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP6NLQ92738 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.09■□□□□ 0.49
USP6NLQ92738 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.09■□□□□ 0.49
USP6NLQ92738 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP6NLQ92738 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.09■□□□□ 0.49
USP6NLQ92738 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.09■□□□□ 0.49
USP6NLQ92738 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.09■□□□□ 0.49
USP6NLQ92738 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
USP6NLQ92738 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP6NLQ92738 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP6NLQ92738 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
USP6NLQ92738 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
USP6NLQ92738 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC18.08■□□□□ 0.49
USP6NLQ92738 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.08■□□□□ 0.49
USP6NLQ92738 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
USP6NLQ92738 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
USP6NLQ92738 AC080080.1-201ENST00000625121 2420 ntBASIC18.08■□□□□ 0.49
USP6NLQ92738 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
USP6NLQ92738 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.08■□□□□ 0.49
USP6NLQ92738 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
USP6NLQ92738 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
USP6NLQ92738 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP6NLQ92738 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
USP6NLQ92738 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC18.08■□□□□ 0.48
USP6NLQ92738 SOCS2P1-201ENST00000417727 557 ntBASIC18.08■□□□□ 0.48
USP6NLQ92738 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
USP6NLQ92738 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
USP6NLQ92738 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.08■□□□□ 0.48
USP6NLQ92738 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP6NLQ92738 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC18.08■□□□□ 0.48
USP6NLQ92738 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC18.08■□□□□ 0.48
USP6NLQ92738 AGER-214ENST00000538695 487 ntTSL 2 BASIC18.08■□□□□ 0.48
USP6NLQ92738 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.08■□□□□ 0.48
USP6NLQ92738 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC18.08■□□□□ 0.48
USP6NLQ92738 AC120045.2-201ENST00000567334 178 ntBASIC18.08■□□□□ 0.48
USP6NLQ92738 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.08■□□□□ 0.48
USP6NLQ92738 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
USP6NLQ92738 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP6NLQ92738 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP6NLQ92738 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
USP6NLQ92738 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
USP6NLQ92738 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.08■□□□□ 0.48
USP6NLQ92738 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP6NLQ92738 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
USP6NLQ92738 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.08■□□□□ 0.48
USP6NLQ92738 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms