Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 AC010491.1-201ENST00000563101 2797 ntBASIC16.39■□□□□ 0.21
PTCD2Q8WV60 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 LINC00554-201ENST00000564841 3011 ntBASIC16.39■□□□□ 0.21
PTCD2Q8WV60 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 AL355816.2-201ENST00000610049 647 ntBASIC16.39■□□□□ 0.21
PTCD2Q8WV60 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTCD2Q8WV60 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PTCD2Q8WV60 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PTCD2Q8WV60 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PTCD2Q8WV60 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTCD2Q8WV60 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTCD2Q8WV60 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.38■□□□□ 0.21
PTCD2Q8WV60 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTCD2Q8WV60 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PTCD2Q8WV60 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTCD2Q8WV60 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PTCD2Q8WV60 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTCD2Q8WV60 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
PTCD2Q8WV60 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.38■□□□□ 0.21
PTCD2Q8WV60 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.38■□□□□ 0.21
PTCD2Q8WV60 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC16.38■□□□□ 0.21
PTCD2Q8WV60 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.38■□□□□ 0.21
PTCD2Q8WV60 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.38■□□□□ 0.21
PTCD2Q8WV60 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.38■□□□□ 0.21
PTCD2Q8WV60 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC16.38■□□□□ 0.21
PTCD2Q8WV60 HLA-J-203ENST00000494367 1087 ntBASIC16.38■□□□□ 0.21
PTCD2Q8WV60 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.38■□□□□ 0.21
PTCD2Q8WV60 RFPL4AP1-201ENST00000530883 850 ntBASIC16.38■□□□□ 0.21
PTCD2Q8WV60 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.38■□□□□ 0.21
PTCD2Q8WV60 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.38■□□□□ 0.21
PTCD2Q8WV60 MIR4321-201ENST00000592276 80 ntBASIC16.38■□□□□ 0.21
PTCD2Q8WV60 AC073389.1-201ENST00000595595 795 ntBASIC16.38■□□□□ 0.21
PTCD2Q8WV60 AL355385.1-201ENST00000606123 409 ntBASIC16.38■□□□□ 0.21
PTCD2Q8WV60 AC106028.4-201ENST00000614509 607 ntBASIC16.38■□□□□ 0.21
PTCD2Q8WV60 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.38■□□□□ 0.21
PTCD2Q8WV60 AC009093.7-201ENST00000623853 1223 ntBASIC16.38■□□□□ 0.21
PTCD2Q8WV60 LINC00628-201ENST00000628516 1289 ntBASIC16.38■□□□□ 0.21
PTCD2Q8WV60 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PTCD2Q8WV60 AP005117.1-202ENST00000581724 1908 ntBASIC16.38■□□□□ 0.21
PTCD2Q8WV60 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PTCD2Q8WV60 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTCD2Q8WV60 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
PTCD2Q8WV60 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.38■□□□□ 0.21
PTCD2Q8WV60 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.38■□□□□ 0.21
PTCD2Q8WV60 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTCD2Q8WV60 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PTCD2Q8WV60 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTCD2Q8WV60 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTCD2Q8WV60 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PTCD2Q8WV60 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.38■□□□□ 0.21
PTCD2Q8WV60 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTCD2Q8WV60 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.38■□□□□ 0.21
PTCD2Q8WV60 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTCD2Q8WV60 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTCD2Q8WV60 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PTCD2Q8WV60 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTCD2Q8WV60 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.37■□□□□ 0.21
PTCD2Q8WV60 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms