Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.36■□□□□ 0.21
SHROOM3Q8TF72 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.36■□□□□ 0.21
SHROOM3Q8TF72 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.36■□□□□ 0.21
SHROOM3Q8TF72 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SHROOM3Q8TF72 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.36■□□□□ 0.21
SHROOM3Q8TF72 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
SHROOM3Q8TF72 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHROOM3Q8TF72 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SHROOM3Q8TF72 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHROOM3Q8TF72 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.36■□□□□ 0.21
SHROOM3Q8TF72 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHROOM3Q8TF72 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SHROOM3Q8TF72 AC018892.3-201ENST00000623986 2499 ntBASIC16.36■□□□□ 0.21
SHROOM3Q8TF72 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
SHROOM3Q8TF72 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.36■□□□□ 0.21
SHROOM3Q8TF72 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 CRB3P1-201ENST00000449338 276 ntBASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 AC051619.7-201ENST00000568314 623 ntBASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 AP005117.1-202ENST00000581724 1908 ntBASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 AC092850.2-201ENST00000623821 2697 ntBASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 AC046158.3-201ENST00000624947 2558 ntBASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 IGHV3-71-201ENST00000523324 359 ntBASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 HNRNPUP1-201ENST00000554987 333 ntBASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 LINC02560-201ENST00000596379 459 ntBASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHROOM3Q8TF72 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
SHROOM3Q8TF72 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SHROOM3Q8TF72 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHROOM3Q8TF72 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SHROOM3Q8TF72 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.34■□□□□ 0.21
SHROOM3Q8TF72 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.34■□□□□ 0.21
SHROOM3Q8TF72 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SHROOM3Q8TF72 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHROOM3Q8TF72 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHROOM3Q8TF72 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHROOM3Q8TF72 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SHROOM3Q8TF72 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHROOM3Q8TF72 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.34■□□□□ 0.21
SHROOM3Q8TF72 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHROOM3Q8TF72 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.34■□□□□ 0.21
SHROOM3Q8TF72 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.34■□□□□ 0.21
SHROOM3Q8TF72 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SHROOM3Q8TF72 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHROOM3Q8TF72 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.34■□□□□ 0.21
SHROOM3Q8TF72 AL390955.2-201ENST00000603032 514 ntBASIC16.34■□□□□ 0.21
SHROOM3Q8TF72 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.34■□□□□ 0.21
SHROOM3Q8TF72 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHROOM3Q8TF72 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHROOM3Q8TF72 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.34■□□□□ 0.21
SHROOM3Q8TF72 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHROOM3Q8TF72 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SHROOM3Q8TF72 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHROOM3Q8TF72 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
SHROOM3Q8TF72 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHROOM3Q8TF72 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SHROOM3Q8TF72 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms