Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RAB3IL1Q8TBN0 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RAB3IL1Q8TBN0 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB3IL1Q8TBN0 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RAB3IL1Q8TBN0 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.14■□□□□ 0.17
RAB3IL1Q8TBN0 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAB3IL1Q8TBN0 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAB3IL1Q8TBN0 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB3IL1Q8TBN0 PTCHD3P3-201ENST00000403073 906 ntBASIC16.14■□□□□ 0.17
RAB3IL1Q8TBN0 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAB3IL1Q8TBN0 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.14■□□□□ 0.17
RAB3IL1Q8TBN0 RBM17P3-201ENST00000417687 1192 ntBASIC16.14■□□□□ 0.17
RAB3IL1Q8TBN0 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.14■□□□□ 0.17
RAB3IL1Q8TBN0 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.14■□□□□ 0.17
RAB3IL1Q8TBN0 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.14■□□□□ 0.17
RAB3IL1Q8TBN0 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.14■□□□□ 0.17
RAB3IL1Q8TBN0 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.14■□□□□ 0.17
RAB3IL1Q8TBN0 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.14■□□□□ 0.17
RAB3IL1Q8TBN0 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.14■□□□□ 0.17
RAB3IL1Q8TBN0 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.14■□□□□ 0.17
RAB3IL1Q8TBN0 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.14■□□□□ 0.17
RAB3IL1Q8TBN0 AL805961.1-202ENST00000641562 540 ntBASIC16.14■□□□□ 0.17
RAB3IL1Q8TBN0 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB3IL1Q8TBN0 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RAB3IL1Q8TBN0 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB3IL1Q8TBN0 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.14■□□□□ 0.17
RAB3IL1Q8TBN0 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.14■□□□□ 0.17
RAB3IL1Q8TBN0 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB3IL1Q8TBN0 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAB3IL1Q8TBN0 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
RAB3IL1Q8TBN0 AC129492.6-201ENST00000611383 1305 ntBASIC16.14■□□□□ 0.17
RAB3IL1Q8TBN0 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.14■□□□□ 0.17
RAB3IL1Q8TBN0 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.14■□□□□ 0.17
RAB3IL1Q8TBN0 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB3IL1Q8TBN0 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.14■□□□□ 0.17
RAB3IL1Q8TBN0 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB3IL1Q8TBN0 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB3IL1Q8TBN0 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB3IL1Q8TBN0 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB3IL1Q8TBN0 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB3IL1Q8TBN0 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAB3IL1Q8TBN0 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB3IL1Q8TBN0 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB3IL1Q8TBN0 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB3IL1Q8TBN0 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB3IL1Q8TBN0 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAB3IL1Q8TBN0 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB3IL1Q8TBN0 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.13■□□□□ 0.17
RAB3IL1Q8TBN0 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAB3IL1Q8TBN0 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB3IL1Q8TBN0 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAB3IL1Q8TBN0 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.13■□□□□ 0.17
RAB3IL1Q8TBN0 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAB3IL1Q8TBN0 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAB3IL1Q8TBN0 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.13■□□□□ 0.17
RAB3IL1Q8TBN0 AL160237.2-201ENST00000556165 472 ntBASIC16.13■□□□□ 0.17
RAB3IL1Q8TBN0 AC099336.1-202ENST00000602961 463 ntBASIC16.13■□□□□ 0.17
RAB3IL1Q8TBN0 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.13■□□□□ 0.17
RAB3IL1Q8TBN0 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.13■□□□□ 0.17
RAB3IL1Q8TBN0 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.13■□□□□ 0.17
RAB3IL1Q8TBN0 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB3IL1Q8TBN0 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB3IL1Q8TBN0 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB3IL1Q8TBN0 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
RAB3IL1Q8TBN0 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RAB3IL1Q8TBN0 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB3IL1Q8TBN0 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB3IL1Q8TBN0 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RAB3IL1Q8TBN0 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
RAB3IL1Q8TBN0 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB3IL1Q8TBN0 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB3IL1Q8TBN0 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.13■□□□□ 0.17
RAB3IL1Q8TBN0 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB3IL1Q8TBN0 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB3IL1Q8TBN0 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.13■□□□□ 0.17
RAB3IL1Q8TBN0 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB3IL1Q8TBN0 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.13■□□□□ 0.17
RAB3IL1Q8TBN0 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.13■□□□□ 0.17
RAB3IL1Q8TBN0 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB3IL1Q8TBN0 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.12■□□□□ 0.17
RAB3IL1Q8TBN0 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB3IL1Q8TBN0 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RAB3IL1Q8TBN0 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.12■□□□□ 0.17
RAB3IL1Q8TBN0 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
RAB3IL1Q8TBN0 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
RAB3IL1Q8TBN0 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB3IL1Q8TBN0 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.12■□□□□ 0.17
RAB3IL1Q8TBN0 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB3IL1Q8TBN0 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.12■□□□□ 0.17
RAB3IL1Q8TBN0 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RAB3IL1Q8TBN0 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB3IL1Q8TBN0 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB3IL1Q8TBN0 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB3IL1Q8TBN0 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.12■□□□□ 0.17
RAB3IL1Q8TBN0 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.12■□□□□ 0.17
RAB3IL1Q8TBN0 NUS1P2-201ENST00000417358 873 ntBASIC16.12■□□□□ 0.17
RAB3IL1Q8TBN0 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.12■□□□□ 0.17
RAB3IL1Q8TBN0 KRT16P4-201ENST00000453883 522 ntBASIC16.12■□□□□ 0.17
RAB3IL1Q8TBN0 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
RAB3IL1Q8TBN0 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 511.5 ms