Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 KRT18P58-201ENST00000527480 1120 ntBASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 AC023141.13-201ENST00000604991 943 ntBASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 FAM197Y3-203ENST00000618346 717 ntBASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 AC025580.3-201ENST00000617932 1424 ntBASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CFAP61Q8NHU2 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CFAP61Q8NHU2 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CFAP61Q8NHU2 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CFAP61Q8NHU2 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CFAP61Q8NHU2 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CFAP61Q8NHU2 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CFAP61Q8NHU2 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CFAP61Q8NHU2 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CFAP61Q8NHU2 AC023274.1-201ENST00000418278 595 ntBASIC16.4■□□□□ 0.22
CFAP61Q8NHU2 HCG4-201ENST00000418983 998 ntBASIC16.4■□□□□ 0.22
CFAP61Q8NHU2 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.4■□□□□ 0.22
CFAP61Q8NHU2 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
CFAP61Q8NHU2 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.4■□□□□ 0.22
CFAP61Q8NHU2 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.4■□□□□ 0.22
CFAP61Q8NHU2 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.4■□□□□ 0.22
CFAP61Q8NHU2 MIR4515-201ENST00000584082 81 ntBASIC16.4■□□□□ 0.22
CFAP61Q8NHU2 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.4■□□□□ 0.22
CFAP61Q8NHU2 AC013467.2-201ENST00000605472 835 ntBASIC16.4■□□□□ 0.22
CFAP61Q8NHU2 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.4■□□□□ 0.22
CFAP61Q8NHU2 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.4■□□□□ 0.22
CFAP61Q8NHU2 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.4■□□□□ 0.22
CFAP61Q8NHU2 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.4■□□□□ 0.22
CFAP61Q8NHU2 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CFAP61Q8NHU2 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CFAP61Q8NHU2 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.4■□□□□ 0.22
CFAP61Q8NHU2 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CFAP61Q8NHU2 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CFAP61Q8NHU2 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CFAP61Q8NHU2 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CFAP61Q8NHU2 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.4■□□□□ 0.22
CFAP61Q8NHU2 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CFAP61Q8NHU2 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.4■□□□□ 0.22
CFAP61Q8NHU2 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CFAP61Q8NHU2 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.4■□□□□ 0.22
CFAP61Q8NHU2 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CFAP61Q8NHU2 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.39■□□□□ 0.22
CFAP61Q8NHU2 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
CFAP61Q8NHU2 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
CFAP61Q8NHU2 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CFAP61Q8NHU2 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CFAP61Q8NHU2 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CFAP61Q8NHU2 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CFAP61Q8NHU2 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CFAP61Q8NHU2 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
CFAP61Q8NHU2 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CFAP61Q8NHU2 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CFAP61Q8NHU2 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CFAP61Q8NHU2 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CFAP61Q8NHU2 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.39■□□□□ 0.21
CFAP61Q8NHU2 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CFAP61Q8NHU2 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CFAP61Q8NHU2 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CFAP61Q8NHU2 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.39■□□□□ 0.21
CFAP61Q8NHU2 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.39■□□□□ 0.21
CFAP61Q8NHU2 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CFAP61Q8NHU2 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CFAP61Q8NHU2 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.39■□□□□ 0.21
CFAP61Q8NHU2 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CFAP61Q8NHU2 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms