Protein–RNA interactions for Protein: Q8NBP7

PCSK9, Proprotein convertase subtilisin/kexin type 9, humanhuman

Known RBP Predictions only

Length 692 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9Q8NBP7 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCSK9Q8NBP7 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCSK9Q8NBP7 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCSK9Q8NBP7 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PCSK9Q8NBP7 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PCSK9Q8NBP7 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCSK9Q8NBP7 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.59■□□□□ 0.41
PCSK9Q8NBP7 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCSK9Q8NBP7 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCSK9Q8NBP7 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCSK9Q8NBP7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.59■□□□□ 0.41
PCSK9Q8NBP7 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCSK9Q8NBP7 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCSK9Q8NBP7 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PCSK9Q8NBP7 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.58■□□□□ 0.41
PCSK9Q8NBP7 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCSK9Q8NBP7 MSTO2P-201ENST00000314835 1709 ntBASIC17.58■□□□□ 0.41
PCSK9Q8NBP7 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PCSK9Q8NBP7 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PCSK9Q8NBP7 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCSK9Q8NBP7 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PCSK9Q8NBP7 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCSK9Q8NBP7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCSK9Q8NBP7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCSK9Q8NBP7 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCSK9Q8NBP7 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PCSK9Q8NBP7 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCSK9Q8NBP7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.58■□□□□ 0.41
PCSK9Q8NBP7 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.58■□□□□ 0.41
PCSK9Q8NBP7 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCSK9Q8NBP7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCSK9Q8NBP7 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCSK9Q8NBP7 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
PCSK9Q8NBP7 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
PCSK9Q8NBP7 MIR1247-201ENST00000408206 136 ntBASIC17.58■□□□□ 0.4
PCSK9Q8NBP7 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.58■□□□□ 0.4
PCSK9Q8NBP7 AC026954.1-201ENST00000429771 1293 ntBASIC17.58■□□□□ 0.4
PCSK9Q8NBP7 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.58■□□□□ 0.4
PCSK9Q8NBP7 RPL13AP20-201ENST00000459725 609 ntBASIC17.58■□□□□ 0.4
PCSK9Q8NBP7 KRT18P43-201ENST00000469825 1281 ntBASIC17.58■□□□□ 0.4
PCSK9Q8NBP7 AC022137.2-201ENST00000503482 481 ntBASIC17.58■□□□□ 0.4
PCSK9Q8NBP7 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.58■□□□□ 0.4
PCSK9Q8NBP7 AC093813.1-201ENST00000605066 256 ntBASIC17.58■□□□□ 0.4
PCSK9Q8NBP7 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.58■□□□□ 0.4
PCSK9Q8NBP7 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.58■□□□□ 0.4
PCSK9Q8NBP7 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.58■□□□□ 0.4
PCSK9Q8NBP7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.58■□□□□ 0.4
PCSK9Q8NBP7 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.58■□□□□ 0.4
PCSK9Q8NBP7 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.58■□□□□ 0.4
PCSK9Q8NBP7 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCSK9Q8NBP7 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCSK9Q8NBP7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCSK9Q8NBP7 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
PCSK9Q8NBP7 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
PCSK9Q8NBP7 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCSK9Q8NBP7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
PCSK9Q8NBP7 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCSK9Q8NBP7 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.57■□□□□ 0.4
PCSK9Q8NBP7 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCSK9Q8NBP7 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCSK9Q8NBP7 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCSK9Q8NBP7 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCSK9Q8NBP7 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
PCSK9Q8NBP7 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCSK9Q8NBP7 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCSK9Q8NBP7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCSK9Q8NBP7 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCSK9Q8NBP7 REXO1L1P-202ENST00000608646 1974 ntBASIC17.57■□□□□ 0.4
PCSK9Q8NBP7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCSK9Q8NBP7 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.57■□□□□ 0.4
PCSK9Q8NBP7 REXO1L8P-201ENST00000604378 1897 ntBASIC17.57■□□□□ 0.4
PCSK9Q8NBP7 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCSK9Q8NBP7 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.57■□□□□ 0.4
PCSK9Q8NBP7 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.57■□□□□ 0.4
PCSK9Q8NBP7 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PCSK9Q8NBP7 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCSK9Q8NBP7 GPAA1P2-201ENST00000417923 928 ntBASIC17.57■□□□□ 0.4
PCSK9Q8NBP7 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.57■□□□□ 0.4
PCSK9Q8NBP7 AC023310.1-201ENST00000554836 735 ntBASIC17.57■□□□□ 0.4
PCSK9Q8NBP7 IGHV3OR16-16-201ENST00000563644 343 ntBASIC17.57■□□□□ 0.4
PCSK9Q8NBP7 MIR3615-201ENST00000581999 87 ntBASIC17.57■□□□□ 0.4
PCSK9Q8NBP7 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.57■□□□□ 0.4
PCSK9Q8NBP7 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.57■□□□□ 0.4
PCSK9Q8NBP7 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.57■□□□□ 0.4
PCSK9Q8NBP7 AC009542.2-202ENST00000619004 1067 ntBASIC17.57■□□□□ 0.4
PCSK9Q8NBP7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCSK9Q8NBP7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PCSK9Q8NBP7 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCSK9Q8NBP7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.57■□□□□ 0.4
PCSK9Q8NBP7 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PCSK9Q8NBP7 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.57■□□□□ 0.4
PCSK9Q8NBP7 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCSK9Q8NBP7 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCSK9Q8NBP7 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.57■□□□□ 0.4
PCSK9Q8NBP7 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCSK9Q8NBP7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCSK9Q8NBP7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCSK9Q8NBP7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.57■□□□□ 0.4
PCSK9Q8NBP7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCSK9Q8NBP7 AC078925.2-201ENST00000624013 1973 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms