Protein–RNA interactions for Protein: Q8N815

CNTD1, Cyclin N-terminal domain-containing protein 1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTD1Q8N815 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CNTD1Q8N815 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.4■□□□□ 0.22
CNTD1Q8N815 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNTD1Q8N815 AC011477.6-201ENST00000604980 1927 ntBASIC16.4■□□□□ 0.22
CNTD1Q8N815 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.4■□□□□ 0.22
CNTD1Q8N815 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNTD1Q8N815 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNTD1Q8N815 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNTD1Q8N815 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CNTD1Q8N815 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CNTD1Q8N815 PRAL-201ENST00000624952 3286 ntBASIC16.4■□□□□ 0.22
CNTD1Q8N815 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
CNTD1Q8N815 MST1L-201ENST00000442552 2185 ntBASIC16.4■□□□□ 0.22
CNTD1Q8N815 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CNTD1Q8N815 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNTD1Q8N815 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
CNTD1Q8N815 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.4■□□□□ 0.22
CNTD1Q8N815 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CNTD1Q8N815 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CNTD1Q8N815 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CNTD1Q8N815 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CNTD1Q8N815 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CNTD1Q8N815 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNTD1Q8N815 BNIP3P1-202ENST00000550043 1585 ntBASIC16.39■□□□□ 0.21
CNTD1Q8N815 AP003680.1-201ENST00000598970 3660 ntBASIC16.39■□□□□ 0.21
CNTD1Q8N815 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNTD1Q8N815 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CNTD1Q8N815 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNTD1Q8N815 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.39■□□□□ 0.21
CNTD1Q8N815 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNTD1Q8N815 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.39■□□□□ 0.21
CNTD1Q8N815 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CNTD1Q8N815 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNTD1Q8N815 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNTD1Q8N815 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CNTD1Q8N815 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CNTD1Q8N815 MIR1233-2-201ENST00000408138 82 ntBASIC16.39■□□□□ 0.21
CNTD1Q8N815 MIR1233-1-201ENST00000408722 82 ntBASIC16.39■□□□□ 0.21
CNTD1Q8N815 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CNTD1Q8N815 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.39■□□□□ 0.21
CNTD1Q8N815 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.39■□□□□ 0.21
CNTD1Q8N815 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.39■□□□□ 0.21
CNTD1Q8N815 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.39■□□□□ 0.21
CNTD1Q8N815 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.39■□□□□ 0.21
CNTD1Q8N815 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.39■□□□□ 0.21
CNTD1Q8N815 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CNTD1Q8N815 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CNTD1Q8N815 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.39■□□□□ 0.21
CNTD1Q8N815 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.39■□□□□ 0.21
CNTD1Q8N815 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNTD1Q8N815 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.39■□□□□ 0.21
CNTD1Q8N815 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNTD1Q8N815 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CNTD1Q8N815 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CNTD1Q8N815 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNTD1Q8N815 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CNTD1Q8N815 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNTD1Q8N815 LINC00554-201ENST00000564841 3011 ntBASIC16.39■□□□□ 0.21
CNTD1Q8N815 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNTD1Q8N815 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNTD1Q8N815 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNTD1Q8N815 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNTD1Q8N815 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNTD1Q8N815 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNTD1Q8N815 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.38■□□□□ 0.21
CNTD1Q8N815 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNTD1Q8N815 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNTD1Q8N815 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CNTD1Q8N815 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNTD1Q8N815 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNTD1Q8N815 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.38■□□□□ 0.21
CNTD1Q8N815 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNTD1Q8N815 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNTD1Q8N815 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CNTD1Q8N815 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNTD1Q8N815 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNTD1Q8N815 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNTD1Q8N815 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CNTD1Q8N815 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CNTD1Q8N815 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CNTD1Q8N815 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.38■□□□□ 0.21
CNTD1Q8N815 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CNTD1Q8N815 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.38■□□□□ 0.21
CNTD1Q8N815 AC018529.1-201ENST00000613063 361 ntBASIC16.38■□□□□ 0.21
CNTD1Q8N815 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.38■□□□□ 0.21
CNTD1Q8N815 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CNTD1Q8N815 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.38■□□□□ 0.21
CNTD1Q8N815 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNTD1Q8N815 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CNTD1Q8N815 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.38■□□□□ 0.21
CNTD1Q8N815 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
CNTD1Q8N815 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.38■□□□□ 0.21
CNTD1Q8N815 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNTD1Q8N815 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CNTD1Q8N815 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.38■□□□□ 0.21
CNTD1Q8N815 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNTD1Q8N815 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNTD1Q8N815 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNTD1Q8N815 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNTD1Q8N815 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms