Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD1Q8N668 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.48□□□□□ -0.25
COMMD1Q8N668 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.48□□□□□ -0.25
COMMD1Q8N668 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
COMMD1Q8N668 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD1Q8N668 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD1Q8N668 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
COMMD1Q8N668 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.47□□□□□ -0.25
COMMD1Q8N668 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD1Q8N668 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD1Q8N668 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD1Q8N668 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.47□□□□□ -0.25
COMMD1Q8N668 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD1Q8N668 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.47□□□□□ -0.25
COMMD1Q8N668 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.47□□□□□ -0.25
COMMD1Q8N668 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
COMMD1Q8N668 AC006486.2-201ENST00000624246 2199 ntBASIC13.47□□□□□ -0.25
COMMD1Q8N668 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD1Q8N668 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD1Q8N668 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.47□□□□□ -0.25
COMMD1Q8N668 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.47□□□□□ -0.25
COMMD1Q8N668 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD1Q8N668 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD1Q8N668 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
COMMD1Q8N668 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD1Q8N668 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.47□□□□□ -0.25
COMMD1Q8N668 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC13.47□□□□□ -0.25
COMMD1Q8N668 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.47□□□□□ -0.25
COMMD1Q8N668 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13.47□□□□□ -0.25
COMMD1Q8N668 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD1Q8N668 KRT18P3-201ENST00000451602 1288 ntBASIC13.47□□□□□ -0.25
COMMD1Q8N668 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
COMMD1Q8N668 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC13.47□□□□□ -0.25
COMMD1Q8N668 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC13.47□□□□□ -0.25
COMMD1Q8N668 AC040169.1-201ENST00000565382 521 ntBASIC13.47□□□□□ -0.25
COMMD1Q8N668 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD1Q8N668 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD1Q8N668 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.47□□□□□ -0.25
COMMD1Q8N668 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD1Q8N668 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
COMMD1Q8N668 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD1Q8N668 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.47□□□□□ -0.25
COMMD1Q8N668 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD1Q8N668 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
COMMD1Q8N668 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.47□□□□□ -0.25
COMMD1Q8N668 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD1Q8N668 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD1Q8N668 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD1Q8N668 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD1Q8N668 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.47□□□□□ -0.25
COMMD1Q8N668 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13.47□□□□□ -0.25
COMMD1Q8N668 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13.47□□□□□ -0.25
COMMD1Q8N668 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD1Q8N668 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD1Q8N668 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
COMMD1Q8N668 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
COMMD1Q8N668 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
COMMD1Q8N668 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
COMMD1Q8N668 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.46□□□□□ -0.25
COMMD1Q8N668 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
COMMD1Q8N668 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
COMMD1Q8N668 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.46□□□□□ -0.25
COMMD1Q8N668 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
COMMD1Q8N668 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.46□□□□□ -0.25
COMMD1Q8N668 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
COMMD1Q8N668 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
COMMD1Q8N668 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
COMMD1Q8N668 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
COMMD1Q8N668 FRMD8P1-201ENST00000440433 1524 ntBASIC13.46□□□□□ -0.25
COMMD1Q8N668 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
COMMD1Q8N668 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
COMMD1Q8N668 AP002414.2-201ENST00000591780 3365 ntBASIC13.46□□□□□ -0.25
COMMD1Q8N668 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.46□□□□□ -0.25
COMMD1Q8N668 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.46□□□□□ -0.25
COMMD1Q8N668 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
COMMD1Q8N668 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.46□□□□□ -0.25
COMMD1Q8N668 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.46□□□□□ -0.25
COMMD1Q8N668 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.46□□□□□ -0.25
COMMD1Q8N668 MIR4751-201ENST00000578027 74 ntBASIC13.46□□□□□ -0.25
COMMD1Q8N668 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.46□□□□□ -0.25
COMMD1Q8N668 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.46□□□□□ -0.25
COMMD1Q8N668 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC13.46□□□□□ -0.25
COMMD1Q8N668 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13.46□□□□□ -0.25
COMMD1Q8N668 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.46□□□□□ -0.25
COMMD1Q8N668 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
COMMD1Q8N668 AC140113.2-201ENST00000604370 208 ntBASIC13.46□□□□□ -0.25
COMMD1Q8N668 AC010654.1-201ENST00000615722 808 ntBASIC13.46□□□□□ -0.25
COMMD1Q8N668 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC13.46□□□□□ -0.25
COMMD1Q8N668 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC13.46□□□□□ -0.25
COMMD1Q8N668 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
COMMD1Q8N668 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
COMMD1Q8N668 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
COMMD1Q8N668 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
COMMD1Q8N668 AC026748.1-201ENST00000624349 3251 ntBASIC13.46□□□□□ -0.25
COMMD1Q8N668 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
COMMD1Q8N668 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
COMMD1Q8N668 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
COMMD1Q8N668 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
COMMD1Q8N668 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.46□□□□□ -0.26
COMMD1Q8N668 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms