Protein–RNA interactions for Protein: Q8N5V2

NGEF, Ephexin-1, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGEFQ8N5V2 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NGEFQ8N5V2 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC21.1■□□□□ 0.97
NGEFQ8N5V2 REXO1L1P-202ENST00000608646 1974 ntBASIC21.1■□□□□ 0.97
NGEFQ8N5V2 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NGEFQ8N5V2 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
NGEFQ8N5V2 LINC02199-201ENST00000506655 2702 ntBASIC21.1■□□□□ 0.97
NGEFQ8N5V2 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC21.1■□□□□ 0.97
NGEFQ8N5V2 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NGEFQ8N5V2 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NGEFQ8N5V2 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
NGEFQ8N5V2 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC21.1■□□□□ 0.97
NGEFQ8N5V2 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
NGEFQ8N5V2 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC21.1■□□□□ 0.97
NGEFQ8N5V2 RAC2-202ENST00000401529 569 ntTSL 4 BASIC21.1■□□□□ 0.97
NGEFQ8N5V2 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC21.1■□□□□ 0.97
NGEFQ8N5V2 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC21.1■□□□□ 0.97
NGEFQ8N5V2 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
NGEFQ8N5V2 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
NGEFQ8N5V2 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC21.1■□□□□ 0.97
NGEFQ8N5V2 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NGEFQ8N5V2 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NGEFQ8N5V2 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC21.1■□□□□ 0.97
NGEFQ8N5V2 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC21.1■□□□□ 0.97
NGEFQ8N5V2 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC21.09■□□□□ 0.97
NGEFQ8N5V2 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
NGEFQ8N5V2 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NGEFQ8N5V2 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
NGEFQ8N5V2 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
NGEFQ8N5V2 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NGEFQ8N5V2 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
NGEFQ8N5V2 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC21.09■□□□□ 0.97
NGEFQ8N5V2 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NGEFQ8N5V2 FO393414.2-201ENST00000405153 598 ntBASIC21.09■□□□□ 0.97
NGEFQ8N5V2 AC015922.1-201ENST00000421102 1152 ntBASIC21.09■□□□□ 0.97
NGEFQ8N5V2 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NGEFQ8N5V2 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC21.09■□□□□ 0.97
NGEFQ8N5V2 POLD4-211ENST00000539074 714 ntTSL 3 BASIC21.09■□□□□ 0.97
NGEFQ8N5V2 SUOX-214ENST00000551841 906 ntTSL 3 BASIC21.09■□□□□ 0.97
NGEFQ8N5V2 BANF1P1-201ENST00000553684 263 ntBASIC21.09■□□□□ 0.97
NGEFQ8N5V2 AC105021.1-202ENST00000570572 669 ntBASIC21.09■□□□□ 0.97
NGEFQ8N5V2 LITAF-210ENST00000571976 548 ntTSL 2 BASIC21.09■□□□□ 0.97
NGEFQ8N5V2 LITAF-214ENST00000574703 486 ntTSL 2 BASIC21.09■□□□□ 0.97
NGEFQ8N5V2 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC21.09■□□□□ 0.97
NGEFQ8N5V2 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC21.09■□□□□ 0.97
NGEFQ8N5V2 COQ4-205ENST00000609948 956 ntTSL 2 BASIC21.09■□□□□ 0.97
NGEFQ8N5V2 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NGEFQ8N5V2 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NGEFQ8N5V2 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC21.09■□□□□ 0.97
NGEFQ8N5V2 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NGEFQ8N5V2 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC21.09■□□□□ 0.97
NGEFQ8N5V2 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NGEFQ8N5V2 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NGEFQ8N5V2 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NGEFQ8N5V2 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
NGEFQ8N5V2 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NGEFQ8N5V2 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC21.08■□□□□ 0.97
NGEFQ8N5V2 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
NGEFQ8N5V2 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NGEFQ8N5V2 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NGEFQ8N5V2 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NGEFQ8N5V2 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NGEFQ8N5V2 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NGEFQ8N5V2 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NGEFQ8N5V2 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
NGEFQ8N5V2 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NGEFQ8N5V2 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NGEFQ8N5V2 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NGEFQ8N5V2 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
NGEFQ8N5V2 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NGEFQ8N5V2 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NGEFQ8N5V2 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
NGEFQ8N5V2 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC21.08■□□□□ 0.97
NGEFQ8N5V2 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC21.08■□□□□ 0.97
NGEFQ8N5V2 TERF1P3-201ENST00000505638 1227 ntBASIC21.08■□□□□ 0.97
NGEFQ8N5V2 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC21.08■□□□□ 0.97
NGEFQ8N5V2 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC21.08■□□□□ 0.97
NGEFQ8N5V2 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC21.08■□□□□ 0.97
NGEFQ8N5V2 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NGEFQ8N5V2 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC21.08■□□□□ 0.97
NGEFQ8N5V2 AC073592.8-201ENST00000624126 511 ntBASIC21.08■□□□□ 0.97
NGEFQ8N5V2 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC21.08■□□□□ 0.97
NGEFQ8N5V2 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
NGEFQ8N5V2 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NGEFQ8N5V2 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NGEFQ8N5V2 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NGEFQ8N5V2 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
NGEFQ8N5V2 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
NGEFQ8N5V2 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
NGEFQ8N5V2 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NGEFQ8N5V2 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NGEFQ8N5V2 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NGEFQ8N5V2 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
NGEFQ8N5V2 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
NGEFQ8N5V2 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NGEFQ8N5V2 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
NGEFQ8N5V2 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NGEFQ8N5V2 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NGEFQ8N5V2 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC21.07■□□□□ 0.96
NGEFQ8N5V2 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NGEFQ8N5V2 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms