Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC83Q8IWF9 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC83Q8IWF9 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC83Q8IWF9 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC83Q8IWF9 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.95■□□□□ 0.62
CCDC83Q8IWF9 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.95■□□□□ 0.62
CCDC83Q8IWF9 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.95■□□□□ 0.62
CCDC83Q8IWF9 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC83Q8IWF9 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC83Q8IWF9 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC83Q8IWF9 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.95■□□□□ 0.62
CCDC83Q8IWF9 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC83Q8IWF9 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC83Q8IWF9 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC83Q8IWF9 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC83Q8IWF9 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC83Q8IWF9 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC83Q8IWF9 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC83Q8IWF9 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC83Q8IWF9 SSR4P1-203ENST00000599569 2260 ntBASIC18.95■□□□□ 0.62
CCDC83Q8IWF9 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC83Q8IWF9 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC83Q8IWF9 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC83Q8IWF9 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CCDC83Q8IWF9 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC83Q8IWF9 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC83Q8IWF9 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC83Q8IWF9 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC83Q8IWF9 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CCDC83Q8IWF9 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CCDC83Q8IWF9 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CCDC83Q8IWF9 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC83Q8IWF9 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC83Q8IWF9 AC011477.6-201ENST00000604980 1927 ntBASIC18.94■□□□□ 0.62
CCDC83Q8IWF9 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC83Q8IWF9 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC83Q8IWF9 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CCDC83Q8IWF9 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CCDC83Q8IWF9 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC83Q8IWF9 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC83Q8IWF9 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC83Q8IWF9 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC83Q8IWF9 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC83Q8IWF9 AC023274.1-201ENST00000418278 595 ntBASIC18.94■□□□□ 0.62
CCDC83Q8IWF9 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
CCDC83Q8IWF9 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC83Q8IWF9 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC83Q8IWF9 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC83Q8IWF9 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.94■□□□□ 0.62
CCDC83Q8IWF9 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC83Q8IWF9 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.94■□□□□ 0.62
CCDC83Q8IWF9 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC83Q8IWF9 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC83Q8IWF9 AC091812.2-201ENST00000619081 385 ntBASIC18.94■□□□□ 0.62
CCDC83Q8IWF9 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC83Q8IWF9 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CCDC83Q8IWF9 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC83Q8IWF9 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC83Q8IWF9 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC83Q8IWF9 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC83Q8IWF9 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC83Q8IWF9 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC83Q8IWF9 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC83Q8IWF9 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC83Q8IWF9 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC83Q8IWF9 AC022532.1-201ENST00000624563 1728 ntBASIC18.94■□□□□ 0.62
CCDC83Q8IWF9 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC83Q8IWF9 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC83Q8IWF9 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC83Q8IWF9 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC83Q8IWF9 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC83Q8IWF9 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC83Q8IWF9 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC83Q8IWF9 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC83Q8IWF9 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CCDC83Q8IWF9 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.93■□□□□ 0.62
CCDC83Q8IWF9 AL591424.1-201ENST00000442569 1213 ntBASIC18.93■□□□□ 0.62
CCDC83Q8IWF9 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC83Q8IWF9 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC83Q8IWF9 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.93■□□□□ 0.62
CCDC83Q8IWF9 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CCDC83Q8IWF9 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC83Q8IWF9 AC073389.1-201ENST00000595595 795 ntBASIC18.93■□□□□ 0.62
CCDC83Q8IWF9 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC83Q8IWF9 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC83Q8IWF9 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC83Q8IWF9 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC83Q8IWF9 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
CCDC83Q8IWF9 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC83Q8IWF9 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC83Q8IWF9 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC83Q8IWF9 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC83Q8IWF9 NID2-208ENST00000617139 3827 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC83Q8IWF9 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC83Q8IWF9 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC83Q8IWF9 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC83Q8IWF9 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC83Q8IWF9 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CCDC83Q8IWF9 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC83Q8IWF9 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms