Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC11□□□□□ -0.65
CSMD3Q7Z407 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC11□□□□□ -0.65
CSMD3Q7Z407 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC11□□□□□ -0.65
CSMD3Q7Z407 AL590640.2-201ENST00000457038 527 ntBASIC11□□□□□ -0.65
CSMD3Q7Z407 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC11□□□□□ -0.65
CSMD3Q7Z407 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC11□□□□□ -0.65
CSMD3Q7Z407 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
CSMD3Q7Z407 GPX4-206ENST00000588919 803 ntTSL 2 BASIC11□□□□□ -0.65
CSMD3Q7Z407 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
CSMD3Q7Z407 TP73-209ENST00000603362 1668 ntTSL 5 BASIC11□□□□□ -0.65
CSMD3Q7Z407 AF254983.2-201ENST00000612331 135 ntBASIC11□□□□□ -0.65
CSMD3Q7Z407 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC11□□□□□ -0.65
CSMD3Q7Z407 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC11□□□□□ -0.65
CSMD3Q7Z407 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CSMD3Q7Z407 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CSMD3Q7Z407 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
CSMD3Q7Z407 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC11□□□□□ -0.65
CSMD3Q7Z407 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC11□□□□□ -0.65
CSMD3Q7Z407 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC11□□□□□ -0.65
CSMD3Q7Z407 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC11□□□□□ -0.65
CSMD3Q7Z407 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 SPTLC1P5-201ENST00000450718 252 ntBASIC10.99□□□□□ -0.65
CSMD3Q7Z407 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC10.99□□□□□ -0.65
CSMD3Q7Z407 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 PAM16-215ENST00000577031 548 ntTSL 4 BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 AL121723.1-201ENST00000445194 1519 ntBASIC10.99□□□□□ -0.65
CSMD3Q7Z407 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 FOS-202ENST00000535987 1402 ntTSL 2 BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 AC245100.5-201ENST00000452108 331 ntBASIC10.99□□□□□ -0.65
CSMD3Q7Z407 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 RERG-205ENST00000537647 935 ntTSL 2 BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 BNIP3P1-202ENST00000550043 1585 ntBASIC10.99□□□□□ -0.65
CSMD3Q7Z407 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CSMD3Q7Z407 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 NDUFV2P1-201ENST00000596415 907 ntBASIC10.98□□□□□ -0.65
CSMD3Q7Z407 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 AL645608.8-201ENST00000606034 2086 ntBASIC10.98□□□□□ -0.65
CSMD3Q7Z407 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 AC234644.1-201ENST00000406065 370 ntBASIC10.98□□□□□ -0.65
CSMD3Q7Z407 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC10.98□□□□□ -0.65
CSMD3Q7Z407 HSPB1P2-201ENST00000448722 546 ntBASIC10.98□□□□□ -0.65
CSMD3Q7Z407 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms