Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
SHFQ7M4L6 MRPL20P1-201ENST00000400819 433 ntBASIC14.63□□□□□ -0.07
SHFQ7M4L6 DUSP5P1-201ENST00000441325 1139 ntBASIC14.63□□□□□ -0.07
SHFQ7M4L6 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.63□□□□□ -0.07
SHFQ7M4L6 RNPS1P1-201ENST00000507437 918 ntBASIC14.63□□□□□ -0.07
SHFQ7M4L6 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.63□□□□□ -0.07
SHFQ7M4L6 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SHFQ7M4L6 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.63□□□□□ -0.07
SHFQ7M4L6 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.63□□□□□ -0.07
SHFQ7M4L6 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SHFQ7M4L6 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SHFQ7M4L6 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
SHFQ7M4L6 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.63□□□□□ -0.07
SHFQ7M4L6 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHFQ7M4L6 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SHFQ7M4L6 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHFQ7M4L6 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
SHFQ7M4L6 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.63□□□□□ -0.07
SHFQ7M4L6 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHFQ7M4L6 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHFQ7M4L6 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.63□□□□□ -0.07
SHFQ7M4L6 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHFQ7M4L6 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHFQ7M4L6 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.63□□□□□ -0.07
SHFQ7M4L6 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SHFQ7M4L6 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SHFQ7M4L6 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.63□□□□□ -0.07
SHFQ7M4L6 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SHFQ7M4L6 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.62□□□□□ -0.07
SHFQ7M4L6 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SHFQ7M4L6 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
SHFQ7M4L6 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHFQ7M4L6 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHFQ7M4L6 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHFQ7M4L6 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHFQ7M4L6 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHFQ7M4L6 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SHFQ7M4L6 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHFQ7M4L6 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHFQ7M4L6 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHFQ7M4L6 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SHFQ7M4L6 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHFQ7M4L6 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
SHFQ7M4L6 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHFQ7M4L6 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHFQ7M4L6 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHFQ7M4L6 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SHFQ7M4L6 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.62□□□□□ -0.07
SHFQ7M4L6 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.62□□□□□ -0.07
SHFQ7M4L6 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
SHFQ7M4L6 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.62□□□□□ -0.07
SHFQ7M4L6 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.62□□□□□ -0.07
SHFQ7M4L6 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.62□□□□□ -0.07
SHFQ7M4L6 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.62□□□□□ -0.07
SHFQ7M4L6 AL356488.2-201ENST00000602755 427 ntBASIC14.62□□□□□ -0.07
SHFQ7M4L6 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.62□□□□□ -0.07
SHFQ7M4L6 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHFQ7M4L6 AC020658.6-201ENST00000623564 1870 ntBASIC14.62□□□□□ -0.07
SHFQ7M4L6 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
SHFQ7M4L6 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
SHFQ7M4L6 AL365209.1-201ENST00000624418 6473 ntBASIC14.62□□□□□ -0.07
SHFQ7M4L6 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.62□□□□□ -0.07
SHFQ7M4L6 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
SHFQ7M4L6 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.62□□□□□ -0.07
SHFQ7M4L6 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHFQ7M4L6 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SHFQ7M4L6 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHFQ7M4L6 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
SHFQ7M4L6 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
SHFQ7M4L6 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SHFQ7M4L6 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
SHFQ7M4L6 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.62□□□□□ -0.07
SHFQ7M4L6 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHFQ7M4L6 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHFQ7M4L6 AC138035.3-201ENST00000622706 2791 ntBASIC14.62□□□□□ -0.07
SHFQ7M4L6 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SHFQ7M4L6 AC006486.2-201ENST00000624246 2199 ntBASIC14.61□□□□□ -0.07
SHFQ7M4L6 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SHFQ7M4L6 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SHFQ7M4L6 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SHFQ7M4L6 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
SHFQ7M4L6 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.61□□□□□ -0.07
SHFQ7M4L6 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SHFQ7M4L6 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHFQ7M4L6 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.61□□□□□ -0.07
SHFQ7M4L6 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.61□□□□□ -0.07
SHFQ7M4L6 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHFQ7M4L6 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SHFQ7M4L6 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.61□□□□□ -0.07
SHFQ7M4L6 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.61□□□□□ -0.07
SHFQ7M4L6 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SHFQ7M4L6 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SHFQ7M4L6 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SHFQ7M4L6 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHFQ7M4L6 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHFQ7M4L6 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SHFQ7M4L6 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
SHFQ7M4L6 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHFQ7M4L6 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.61□□□□□ -0.07
SHFQ7M4L6 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms