Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF44Q7L0R7 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF44Q7L0R7 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF44Q7L0R7 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF44Q7L0R7 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF44Q7L0R7 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RNF44Q7L0R7 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF44Q7L0R7 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.45■□□□□ 0.06
RNF44Q7L0R7 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.45■□□□□ 0.06
RNF44Q7L0R7 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF44Q7L0R7 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
RNF44Q7L0R7 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.45■□□□□ 0.06
RNF44Q7L0R7 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.45■□□□□ 0.06
RNF44Q7L0R7 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF44Q7L0R7 AC092580.3-201ENST00000430932 139 ntBASIC15.45■□□□□ 0.06
RNF44Q7L0R7 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
RNF44Q7L0R7 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.45■□□□□ 0.06
RNF44Q7L0R7 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RNF44Q7L0R7 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF44Q7L0R7 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
RNF44Q7L0R7 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.45■□□□□ 0.06
RNF44Q7L0R7 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF44Q7L0R7 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.45■□□□□ 0.06
RNF44Q7L0R7 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RNF44Q7L0R7 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.45■□□□□ 0.06
RNF44Q7L0R7 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF44Q7L0R7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
RNF44Q7L0R7 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF44Q7L0R7 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
RNF44Q7L0R7 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.45■□□□□ 0.06
RNF44Q7L0R7 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
RNF44Q7L0R7 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
RNF44Q7L0R7 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RNF44Q7L0R7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RNF44Q7L0R7 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.45■□□□□ 0.06
RNF44Q7L0R7 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
RNF44Q7L0R7 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF44Q7L0R7 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.44■□□□□ 0.06
RNF44Q7L0R7 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF44Q7L0R7 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
RNF44Q7L0R7 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.44■□□□□ 0.06
RNF44Q7L0R7 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF44Q7L0R7 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RNF44Q7L0R7 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF44Q7L0R7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF44Q7L0R7 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.44■□□□□ 0.06
RNF44Q7L0R7 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
RNF44Q7L0R7 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
RNF44Q7L0R7 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.44■□□□□ 0.06
RNF44Q7L0R7 AC055876.3-201ENST00000431496 288 ntBASIC15.44■□□□□ 0.06
RNF44Q7L0R7 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.44■□□□□ 0.06
RNF44Q7L0R7 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF44Q7L0R7 AC097493.3-201ENST00000509725 367 ntBASIC15.44■□□□□ 0.06
RNF44Q7L0R7 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.44■□□□□ 0.06
RNF44Q7L0R7 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.44■□□□□ 0.06
RNF44Q7L0R7 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.44■□□□□ 0.06
RNF44Q7L0R7 AL589739.1-201ENST00000607720 493 ntBASIC15.44■□□□□ 0.06
RNF44Q7L0R7 AC138649.4-201ENST00000612222 287 ntBASIC15.44■□□□□ 0.06
RNF44Q7L0R7 AL138828.2-201ENST00000615812 383 ntBASIC15.44■□□□□ 0.06
RNF44Q7L0R7 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
RNF44Q7L0R7 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF44Q7L0R7 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF44Q7L0R7 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
RNF44Q7L0R7 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF44Q7L0R7 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RNF44Q7L0R7 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RNF44Q7L0R7 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.44■□□□□ 0.06
RNF44Q7L0R7 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.44■□□□□ 0.06
RNF44Q7L0R7 AL118508.1-201ENST00000613502 2345 ntBASIC15.44■□□□□ 0.06
RNF44Q7L0R7 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF44Q7L0R7 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF44Q7L0R7 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.44■□□□□ 0.06
RNF44Q7L0R7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
RNF44Q7L0R7 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF44Q7L0R7 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF44Q7L0R7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.44■□□□□ 0.06
RNF44Q7L0R7 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF44Q7L0R7 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RNF44Q7L0R7 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RNF44Q7L0R7 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
RNF44Q7L0R7 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.43■□□□□ 0.06
RNF44Q7L0R7 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
RNF44Q7L0R7 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF44Q7L0R7 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
RNF44Q7L0R7 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
RNF44Q7L0R7 AC092364.2-201ENST00000596710 2692 ntBASIC15.43■□□□□ 0.06
RNF44Q7L0R7 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.43■□□□□ 0.06
RNF44Q7L0R7 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF44Q7L0R7 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF44Q7L0R7 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.43■□□□□ 0.06
RNF44Q7L0R7 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF44Q7L0R7 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
RNF44Q7L0R7 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RNF44Q7L0R7 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RNF44Q7L0R7 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF44Q7L0R7 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RNF44Q7L0R7 MIR648-201ENST00000385046 94 ntBASIC15.43■□□□□ 0.06
RNF44Q7L0R7 MIR770-201ENST00000390219 98 ntBASIC15.43■□□□□ 0.06
RNF44Q7L0R7 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF44Q7L0R7 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms