Protein–RNA interactions for Protein: Q71RC9

SMIM5, Small integral membrane protein 5, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM5Q71RC9 AC022137.2-201ENST00000503482 481 ntBASIC20.06■□□□□ 0.8
SMIM5Q71RC9 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SMIM5Q71RC9 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC20.06■□□□□ 0.8
SMIM5Q71RC9 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC20.06■□□□□ 0.8
SMIM5Q71RC9 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SMIM5Q71RC9 HNRNPUP1-201ENST00000554987 333 ntBASIC20.06■□□□□ 0.8
SMIM5Q71RC9 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
SMIM5Q71RC9 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC20.06■□□□□ 0.8
SMIM5Q71RC9 AC106872.11-201ENST00000605838 421 ntBASIC20.06■□□□□ 0.8
SMIM5Q71RC9 LARP4-220ENST00000615080 856 ntTSL 5 BASIC20.06■□□□□ 0.8
SMIM5Q71RC9 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SMIM5Q71RC9 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SMIM5Q71RC9 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMIM5Q71RC9 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SMIM5Q71RC9 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SMIM5Q71RC9 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SMIM5Q71RC9 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SMIM5Q71RC9 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMIM5Q71RC9 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMIM5Q71RC9 AGER-206ENST00000375070 1463 ntTSL 5 BASIC20.05■□□□□ 0.8
SMIM5Q71RC9 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SMIM5Q71RC9 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SMIM5Q71RC9 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SMIM5Q71RC9 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMIM5Q71RC9 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMIM5Q71RC9 DRD5P1-201ENST00000456605 1438 ntBASIC20.05■□□□□ 0.8
SMIM5Q71RC9 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMIM5Q71RC9 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMIM5Q71RC9 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMIM5Q71RC9 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMIM5Q71RC9 AC006001.1-201ENST00000325130 474 ntBASIC20.05■□□□□ 0.8
SMIM5Q71RC9 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SMIM5Q71RC9 GGCT-203ENST00000409144 836 ntTSL 2 BASIC20.05■□□□□ 0.8
SMIM5Q71RC9 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC20.05■□□□□ 0.8
SMIM5Q71RC9 C2orf27AP3-201ENST00000434123 579 ntBASIC20.05■□□□□ 0.8
SMIM5Q71RC9 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC20.05■□□□□ 0.8
SMIM5Q71RC9 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC20.05■□□□□ 0.8
SMIM5Q71RC9 AHRR-211ENST00000515206 462 ntTSL 5 BASIC20.05■□□□□ 0.8
SMIM5Q71RC9 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SMIM5Q71RC9 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SMIM5Q71RC9 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC20.05■□□□□ 0.8
SMIM5Q71RC9 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC20.05■□□□□ 0.8
SMIM5Q71RC9 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC20.05■□□□□ 0.8
SMIM5Q71RC9 AL354718.3-201ENST00000616414 581 ntBASIC20.05■□□□□ 0.8
SMIM5Q71RC9 CR382287.1-201ENST00000623954 586 ntBASIC20.05■□□□□ 0.8
SMIM5Q71RC9 SNX1-214ENST00000625244 324 ntTSL 5 BASIC20.05■□□□□ 0.8
SMIM5Q71RC9 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.05■□□□□ 0.8
SMIM5Q71RC9 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SMIM5Q71RC9 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMIM5Q71RC9 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SMIM5Q71RC9 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMIM5Q71RC9 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMIM5Q71RC9 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMIM5Q71RC9 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMIM5Q71RC9 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SMIM5Q71RC9 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.05■□□□□ 0.8
SMIM5Q71RC9 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMIM5Q71RC9 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC20.05■□□□□ 0.8
SMIM5Q71RC9 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
SMIM5Q71RC9 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.05■□□□□ 0.8
SMIM5Q71RC9 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SMIM5Q71RC9 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMIM5Q71RC9 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMIM5Q71RC9 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMIM5Q71RC9 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMIM5Q71RC9 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMIM5Q71RC9 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SMIM5Q71RC9 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SMIM5Q71RC9 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SMIM5Q71RC9 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SMIM5Q71RC9 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC20.04■□□□□ 0.8
SMIM5Q71RC9 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SMIM5Q71RC9 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.04■□□□□ 0.8
SMIM5Q71RC9 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMIM5Q71RC9 AL121723.1-201ENST00000445194 1519 ntBASIC20.04■□□□□ 0.8
SMIM5Q71RC9 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
SMIM5Q71RC9 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC20.04■□□□□ 0.8
SMIM5Q71RC9 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
SMIM5Q71RC9 MIR1202-201ENST00000408529 83 ntBASIC20.04■□□□□ 0.8
SMIM5Q71RC9 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SMIM5Q71RC9 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC20.04■□□□□ 0.8
SMIM5Q71RC9 Z93015.1-201ENST00000451718 390 ntBASIC20.04■□□□□ 0.8
SMIM5Q71RC9 REEP1-202ENST00000453231 940 ntTSL 2 BASIC20.04■□□□□ 0.8
SMIM5Q71RC9 RPL13AP25-201ENST00000484130 612 ntBASIC20.04■□□□□ 0.8
SMIM5Q71RC9 RPSAP36-202ENST00000494591 1261 ntBASIC20.04■□□□□ 0.8
SMIM5Q71RC9 ADM-202ENST00000524948 584 ntTSL 2 BASIC20.04■□□□□ 0.8
SMIM5Q71RC9 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC20.04■□□□□ 0.8
SMIM5Q71RC9 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC20.04■□□□□ 0.8
SMIM5Q71RC9 KC6-205ENST00000599934 556 ntTSL 4 BASIC20.04■□□□□ 0.8
SMIM5Q71RC9 U62317.3-201ENST00000608319 855 ntBASIC20.04■□□□□ 0.8
SMIM5Q71RC9 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMIM5Q71RC9 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMIM5Q71RC9 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC20.04■□□□□ 0.8
SMIM5Q71RC9 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMIM5Q71RC9 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC20.04■□□□□ 0.8
SMIM5Q71RC9 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SMIM5Q71RC9 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC20.04■□□□□ 0.8
SMIM5Q71RC9 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
SMIM5Q71RC9 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMIM5Q71RC9 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms