Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 AC093214.1-201ENST00000511688 1107 ntBASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 AC069120.2-201ENST00000524091 540 ntBASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 AC104640.1-201ENST00000562617 2109 ntBASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 ME2P1-201ENST00000426028 1970 ntBASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RFWD3Q6PCD5 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.81■□□□□ 0.28
RFWD3Q6PCD5 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFWD3Q6PCD5 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFWD3Q6PCD5 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFWD3Q6PCD5 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFWD3Q6PCD5 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.81■□□□□ 0.28
RFWD3Q6PCD5 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.81■□□□□ 0.28
RFWD3Q6PCD5 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RFWD3Q6PCD5 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.81■□□□□ 0.28
RFWD3Q6PCD5 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RFWD3Q6PCD5 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.81■□□□□ 0.28
RFWD3Q6PCD5 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFWD3Q6PCD5 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFWD3Q6PCD5 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFWD3Q6PCD5 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RFWD3Q6PCD5 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.81■□□□□ 0.28
RFWD3Q6PCD5 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RFWD3Q6PCD5 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFWD3Q6PCD5 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFWD3Q6PCD5 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFWD3Q6PCD5 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RFWD3Q6PCD5 AL353705.2-201ENST00000428243 662 ntBASIC16.81■□□□□ 0.28
RFWD3Q6PCD5 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RFWD3Q6PCD5 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.81■□□□□ 0.28
RFWD3Q6PCD5 IGHV3-42-201ENST00000520410 361 ntBASIC16.81■□□□□ 0.28
RFWD3Q6PCD5 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RFWD3Q6PCD5 BANF1P1-201ENST00000553684 263 ntBASIC16.81■□□□□ 0.28
RFWD3Q6PCD5 AC061975.2-201ENST00000581722 295 ntBASIC16.81■□□□□ 0.28
RFWD3Q6PCD5 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFWD3Q6PCD5 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.81■□□□□ 0.28
RFWD3Q6PCD5 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.81■□□□□ 0.28
RFWD3Q6PCD5 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RFWD3Q6PCD5 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.81■□□□□ 0.28
RFWD3Q6PCD5 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFWD3Q6PCD5 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.81■□□□□ 0.28
RFWD3Q6PCD5 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFWD3Q6PCD5 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.81■□□□□ 0.28
RFWD3Q6PCD5 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.81■□□□□ 0.28
RFWD3Q6PCD5 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFWD3Q6PCD5 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFWD3Q6PCD5 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFWD3Q6PCD5 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFWD3Q6PCD5 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFWD3Q6PCD5 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RFWD3Q6PCD5 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
RFWD3Q6PCD5 U82695.1-201ENST00000635752 1889 ntBASIC16.8■□□□□ 0.28
RFWD3Q6PCD5 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RFWD3Q6PCD5 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFWD3Q6PCD5 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFWD3Q6PCD5 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RFWD3Q6PCD5 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.8■□□□□ 0.28
RFWD3Q6PCD5 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RFWD3Q6PCD5 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.8■□□□□ 0.28
RFWD3Q6PCD5 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFWD3Q6PCD5 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.8■□□□□ 0.28
RFWD3Q6PCD5 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.8■□□□□ 0.28
RFWD3Q6PCD5 AC092580.3-201ENST00000430932 139 ntBASIC16.8■□□□□ 0.28
RFWD3Q6PCD5 MTND6P24-201ENST00000440466 518 ntBASIC16.8■□□□□ 0.28
RFWD3Q6PCD5 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.8■□□□□ 0.28
RFWD3Q6PCD5 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.8■□□□□ 0.28
RFWD3Q6PCD5 AC097493.3-201ENST00000509725 367 ntBASIC16.8■□□□□ 0.28
RFWD3Q6PCD5 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.8■□□□□ 0.28
RFWD3Q6PCD5 AL390754.1-201ENST00000619088 582 ntBASIC16.8■□□□□ 0.28
RFWD3Q6PCD5 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RFWD3Q6PCD5 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RFWD3Q6PCD5 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFWD3Q6PCD5 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFWD3Q6PCD5 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFWD3Q6PCD5 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFWD3Q6PCD5 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RFWD3Q6PCD5 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFWD3Q6PCD5 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms