Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.82■□□□□ 0.28
TTC39BQ5VTQ0 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TTC39BQ5VTQ0 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
TTC39BQ5VTQ0 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 TUBB3P1-201ENST00000405796 1332 ntBASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 KLF2P3-201ENST00000451977 1087 ntBASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 CYMP-203ENST00000474680 1263 ntBASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 AC051619.7-201ENST00000568314 623 ntBASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 AC027796.2-201ENST00000575326 344 ntBASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 AC007967.4-201ENST00000614700 386 ntBASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 AL603832.2-201ENST00000566195 2125 ntBASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TTC39BQ5VTQ0 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.8■□□□□ 0.28
TTC39BQ5VTQ0 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TTC39BQ5VTQ0 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TTC39BQ5VTQ0 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TTC39BQ5VTQ0 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TTC39BQ5VTQ0 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TTC39BQ5VTQ0 AL596257.1-201ENST00000641463 2694 ntBASIC16.8■□□□□ 0.28
TTC39BQ5VTQ0 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TTC39BQ5VTQ0 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TTC39BQ5VTQ0 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.8■□□□□ 0.28
TTC39BQ5VTQ0 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TTC39BQ5VTQ0 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TTC39BQ5VTQ0 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.8■□□□□ 0.28
TTC39BQ5VTQ0 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TTC39BQ5VTQ0 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TTC39BQ5VTQ0 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TTC39BQ5VTQ0 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TTC39BQ5VTQ0 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.8■□□□□ 0.28
TTC39BQ5VTQ0 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TTC39BQ5VTQ0 AC125807.1-201ENST00000483097 614 ntBASIC16.8■□□□□ 0.28
TTC39BQ5VTQ0 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TTC39BQ5VTQ0 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TTC39BQ5VTQ0 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TTC39BQ5VTQ0 AC008677.1-201ENST00000519230 1561 ntBASIC16.8■□□□□ 0.28
TTC39BQ5VTQ0 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TTC39BQ5VTQ0 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TTC39BQ5VTQ0 AC006449.6-201ENST00000612330 2296 ntBASIC16.8■□□□□ 0.28
TTC39BQ5VTQ0 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TTC39BQ5VTQ0 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TTC39BQ5VTQ0 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TTC39BQ5VTQ0 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.8■□□□□ 0.28
TTC39BQ5VTQ0 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.8■□□□□ 0.28
TTC39BQ5VTQ0 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TTC39BQ5VTQ0 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.79■□□□□ 0.28
TTC39BQ5VTQ0 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TTC39BQ5VTQ0 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TTC39BQ5VTQ0 AL035456.1-201ENST00000456064 1369 ntBASIC16.79■□□□□ 0.28
TTC39BQ5VTQ0 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.79■□□□□ 0.28
TTC39BQ5VTQ0 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TTC39BQ5VTQ0 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TTC39BQ5VTQ0 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.79■□□□□ 0.28
TTC39BQ5VTQ0 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TTC39BQ5VTQ0 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TTC39BQ5VTQ0 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.79■□□□□ 0.28
TTC39BQ5VTQ0 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TTC39BQ5VTQ0 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms