Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 AL136982.4-201ENST00000437689 1740 ntBASIC16.7■□□□□ 0.26
LRRC38Q5VT99 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC38Q5VT99 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC38Q5VT99 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRC38Q5VT99 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC38Q5VT99 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.69■□□□□ 0.26
LRRC38Q5VT99 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
LRRC38Q5VT99 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC38Q5VT99 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC38Q5VT99 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC38Q5VT99 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC38Q5VT99 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC38Q5VT99 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC38Q5VT99 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.69■□□□□ 0.26
LRRC38Q5VT99 AC136621.1-201ENST00000624017 2304 ntBASIC16.69■□□□□ 0.26
LRRC38Q5VT99 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC38Q5VT99 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC38Q5VT99 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC38Q5VT99 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
LRRC38Q5VT99 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC38Q5VT99 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC38Q5VT99 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRC38Q5VT99 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRC38Q5VT99 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.69■□□□□ 0.26
LRRC38Q5VT99 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRC38Q5VT99 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRC38Q5VT99 MIR4313-201ENST00000580760 101 ntBASIC16.69■□□□□ 0.26
LRRC38Q5VT99 AC026979.3-201ENST00000607315 403 ntBASIC16.69■□□□□ 0.26
LRRC38Q5VT99 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.69■□□□□ 0.26
LRRC38Q5VT99 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
LRRC38Q5VT99 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
LRRC38Q5VT99 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC38Q5VT99 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC38Q5VT99 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.69■□□□□ 0.26
LRRC38Q5VT99 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC38Q5VT99 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
LRRC38Q5VT99 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRC38Q5VT99 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC38Q5VT99 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC38Q5VT99 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.69■□□□□ 0.26
LRRC38Q5VT99 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC38Q5VT99 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC38Q5VT99 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC38Q5VT99 AC090616.6-203ENST00000579186 1945 ntBASIC16.68■□□□□ 0.26
LRRC38Q5VT99 AP003680.1-201ENST00000598970 3660 ntBASIC16.68■□□□□ 0.26
LRRC38Q5VT99 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.68■□□□□ 0.26
LRRC38Q5VT99 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC38Q5VT99 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC38Q5VT99 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.68■□□□□ 0.26
LRRC38Q5VT99 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
LRRC38Q5VT99 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC38Q5VT99 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC38Q5VT99 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC38Q5VT99 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC38Q5VT99 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC38Q5VT99 AC087481.3-201ENST00000602886 1894 ntBASIC16.68■□□□□ 0.26
LRRC38Q5VT99 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC38Q5VT99 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
LRRC38Q5VT99 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC38Q5VT99 MIR940-201ENST00000401276 94 ntBASIC16.68■□□□□ 0.26
LRRC38Q5VT99 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
LRRC38Q5VT99 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
LRRC38Q5VT99 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.68■□□□□ 0.26
LRRC38Q5VT99 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.68■□□□□ 0.26
LRRC38Q5VT99 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC38Q5VT99 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.68■□□□□ 0.26
LRRC38Q5VT99 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC38Q5VT99 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC38Q5VT99 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC38Q5VT99 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC38Q5VT99 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.68■□□□□ 0.26
LRRC38Q5VT99 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.68■□□□□ 0.26
LRRC38Q5VT99 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.68■□□□□ 0.26
LRRC38Q5VT99 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC38Q5VT99 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC38Q5VT99 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.68■□□□□ 0.26
LRRC38Q5VT99 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC38Q5VT99 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC38Q5VT99 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.68■□□□□ 0.26
LRRC38Q5VT99 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.68■□□□□ 0.26
LRRC38Q5VT99 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC38Q5VT99 CYP4F24P-201ENST00000586049 1580 ntBASIC16.68■□□□□ 0.26
LRRC38Q5VT99 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
LRRC38Q5VT99 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC38Q5VT99 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC38Q5VT99 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms