Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 SLC25A6P2-201ENST00000497974 877 ntBASIC14.5□□□□□ -0.09
CCDC58Q4VC31 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 AL805961.1-202ENST00000641562 540 ntBASIC14.5□□□□□ -0.09
CCDC58Q4VC31 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC58Q4VC31 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 U82695.1-201ENST00000635752 1889 ntBASIC14.49□□□□□ -0.09
CCDC58Q4VC31 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 AC107918.2-201ENST00000530817 355 ntBASIC14.49□□□□□ -0.09
CCDC58Q4VC31 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.49□□□□□ -0.09
CCDC58Q4VC31 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.49□□□□□ -0.09
CCDC58Q4VC31 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC58Q4VC31 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC58Q4VC31 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.48□□□□□ -0.09
CCDC58Q4VC31 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.48□□□□□ -0.09
CCDC58Q4VC31 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.48□□□□□ -0.09
CCDC58Q4VC31 AC092919.2-201ENST00000623631 1645 ntBASIC14.48□□□□□ -0.09
CCDC58Q4VC31 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC58Q4VC31 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms