Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC144BQ3MJ40 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CCDC144BQ3MJ40 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC144BQ3MJ40 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CCDC144BQ3MJ40 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC144BQ3MJ40 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC144BQ3MJ40 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC144BQ3MJ40 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC144BQ3MJ40 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC144BQ3MJ40 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC144BQ3MJ40 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC144BQ3MJ40 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC144BQ3MJ40 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC144BQ3MJ40 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CCDC144BQ3MJ40 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC144BQ3MJ40 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC144BQ3MJ40 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.69■□□□□ 0.58
CCDC144BQ3MJ40 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC144BQ3MJ40 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC144BQ3MJ40 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CCDC144BQ3MJ40 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC144BQ3MJ40 AC004233.3-201ENST00000607794 1269 ntBASIC18.69■□□□□ 0.58
CCDC144BQ3MJ40 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC144BQ3MJ40 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC144BQ3MJ40 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC144BQ3MJ40 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC144BQ3MJ40 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC144BQ3MJ40 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC144BQ3MJ40 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC144BQ3MJ40 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC144BQ3MJ40 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC144BQ3MJ40 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.69■□□□□ 0.58
CCDC144BQ3MJ40 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CCDC144BQ3MJ40 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC144BQ3MJ40 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC144BQ3MJ40 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
CCDC144BQ3MJ40 AC006538.1-201ENST00000567905 1585 ntBASIC18.68■□□□□ 0.58
CCDC144BQ3MJ40 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC144BQ3MJ40 AL596087.1-201ENST00000400979 1969 ntBASIC18.68■□□□□ 0.58
CCDC144BQ3MJ40 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC144BQ3MJ40 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC144BQ3MJ40 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC144BQ3MJ40 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC144BQ3MJ40 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC144BQ3MJ40 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC144BQ3MJ40 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC144BQ3MJ40 SPTLC1P1-201ENST00000447199 261 ntBASIC18.68■□□□□ 0.58
CCDC144BQ3MJ40 AP002490.2-201ENST00000524791 560 ntBASIC18.68■□□□□ 0.58
CCDC144BQ3MJ40 AL596325.1-201ENST00000563991 1082 ntBASIC18.68■□□□□ 0.58
CCDC144BQ3MJ40 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC144BQ3MJ40 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC144BQ3MJ40 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC144BQ3MJ40 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CCDC144BQ3MJ40 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CCDC144BQ3MJ40 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC144BQ3MJ40 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC144BQ3MJ40 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC144BQ3MJ40 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC144BQ3MJ40 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC144BQ3MJ40 AL671710.1-201ENST00000610245 2349 ntBASIC18.68■□□□□ 0.58
CCDC144BQ3MJ40 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC144BQ3MJ40 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC144BQ3MJ40 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CCDC144BQ3MJ40 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC144BQ3MJ40 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC144BQ3MJ40 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC144BQ3MJ40 AC073439.1-201ENST00000624121 1774 ntBASIC18.68■□□□□ 0.58
CCDC144BQ3MJ40 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC144BQ3MJ40 AL035456.1-201ENST00000456064 1369 ntBASIC18.68■□□□□ 0.58
CCDC144BQ3MJ40 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC144BQ3MJ40 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC144BQ3MJ40 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC144BQ3MJ40 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC144BQ3MJ40 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC144BQ3MJ40 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC144BQ3MJ40 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC144BQ3MJ40 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC144BQ3MJ40 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC144BQ3MJ40 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC144BQ3MJ40 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC144BQ3MJ40 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC144BQ3MJ40 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC144BQ3MJ40 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC144BQ3MJ40 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC144BQ3MJ40 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC144BQ3MJ40 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC144BQ3MJ40 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.67■□□□□ 0.58
CCDC144BQ3MJ40 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC144BQ3MJ40 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC144BQ3MJ40 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC144BQ3MJ40 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC144BQ3MJ40 CR383656.12-201ENST00000549567 513 ntBASIC18.67■□□□□ 0.58
CCDC144BQ3MJ40 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC144BQ3MJ40 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC144BQ3MJ40 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC144BQ3MJ40 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.67■□□□□ 0.58
CCDC144BQ3MJ40 SPTSSB-204ENST00000617024 1292 ntBASIC18.67■□□□□ 0.58
CCDC144BQ3MJ40 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC144BQ3MJ40 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC144BQ3MJ40 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms