Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 AL121912.1-201ENST00000603683 238 ntBASIC15.03■□□□□ -0
CD47Q08722 TP73-AS1-207ENST00000624167 988 ntBASIC15.03■□□□□ -0
CD47Q08722 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.03■□□□□ -0
CD47Q08722 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
CD47Q08722 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.03■□□□□ -0
CD47Q08722 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CD47Q08722 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
CD47Q08722 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.03■□□□□ -0
CD47Q08722 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.03■□□□□ -0
CD47Q08722 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CD47Q08722 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CD47Q08722 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.03■□□□□ -0
CD47Q08722 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CD47Q08722 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CD47Q08722 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CD47Q08722 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CD47Q08722 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.02■□□□□ -0
CD47Q08722 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.02■□□□□ -0
CD47Q08722 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CD47Q08722 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.02■□□□□ -0
CD47Q08722 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.02■□□□□ -0
CD47Q08722 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.02■□□□□ -0
CD47Q08722 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.02■□□□□ -0
CD47Q08722 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CD47Q08722 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CD47Q08722 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CD47Q08722 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.02■□□□□ -0
CD47Q08722 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.02■□□□□ -0
CD47Q08722 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.02■□□□□ -0
CD47Q08722 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.02■□□□□ -0
CD47Q08722 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.02■□□□□ -0
CD47Q08722 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.02■□□□□ -0
CD47Q08722 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
CD47Q08722 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.02■□□□□ -0
CD47Q08722 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CD47Q08722 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CD47Q08722 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.02■□□□□ -0
CD47Q08722 AC004870.1-201ENST00000315132 882 ntBASIC15.02■□□□□ -0
CD47Q08722 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.02■□□□□ -0
CD47Q08722 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CD47Q08722 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.02■□□□□ -0
CD47Q08722 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.02■□□□□ -0
CD47Q08722 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.02■□□□□ -0
CD47Q08722 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.02■□□□□ -0
CD47Q08722 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.02■□□□□ -0
CD47Q08722 RPS15P9-201ENST00000494093 319 ntBASIC15.02■□□□□ -0
CD47Q08722 AC136632.2-201ENST00000512891 861 ntBASIC15.02■□□□□ -0
CD47Q08722 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.02■□□□□ -0
CD47Q08722 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.02■□□□□ -0
CD47Q08722 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.02■□□□□ -0
CD47Q08722 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.02■□□□□ -0
CD47Q08722 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.02■□□□□ -0
CD47Q08722 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.02■□□□□ -0
CD47Q08722 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.02□□□□□ -0.01
CD47Q08722 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CD47Q08722 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CD47Q08722 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CD47Q08722 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CD47Q08722 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CD47Q08722 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.02□□□□□ -0.01
CD47Q08722 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CD47Q08722 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
CD47Q08722 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CD47Q08722 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CD47Q08722 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CD47Q08722 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CD47Q08722 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CD47Q08722 AL359258.3-201ENST00000622910 2331 ntBASIC15.01□□□□□ -0.01
CD47Q08722 AC087481.3-201ENST00000602886 1894 ntBASIC15.01□□□□□ -0.01
CD47Q08722 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD47Q08722 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.01□□□□□ -0.01
CD47Q08722 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CD47Q08722 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD47Q08722 AC005089.1-201ENST00000619486 2241 ntBASIC15.01□□□□□ -0.01
CD47Q08722 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD47Q08722 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CD47Q08722 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD47Q08722 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD47Q08722 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CD47Q08722 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.01□□□□□ -0.01
CD47Q08722 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD47Q08722 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.01□□□□□ -0.01
CD47Q08722 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.01□□□□□ -0.01
CD47Q08722 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CD47Q08722 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD47Q08722 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD47Q08722 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CD47Q08722 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.01□□□□□ -0.01
CD47Q08722 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.01□□□□□ -0.01
CD47Q08722 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CD47Q08722 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD47Q08722 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD47Q08722 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.01□□□□□ -0.01
CD47Q08722 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.01□□□□□ -0.01
CD47Q08722 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.01□□□□□ -0.01
CD47Q08722 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CD47Q08722 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CD47Q08722 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.01□□□□□ -0.01
CD47Q08722 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CD47Q08722 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms