Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.25■□□□□ 0.03
RAE1P78406 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAE1P78406 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RAE1P78406 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAE1P78406 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAE1P78406 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.25■□□□□ 0.03
RAE1P78406 AC105250.1-201ENST00000509378 2057 ntBASIC15.25■□□□□ 0.03
RAE1P78406 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAE1P78406 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAE1P78406 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
RAE1P78406 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.25■□□□□ 0.03
RAE1P78406 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.25■□□□□ 0.03
RAE1P78406 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.25■□□□□ 0.03
RAE1P78406 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.25■□□□□ 0.03
RAE1P78406 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.25■□□□□ 0.03
RAE1P78406 AC093520.2-201ENST00000561830 333 ntBASIC15.25■□□□□ 0.03
RAE1P78406 RARRES2P9-201ENST00000565168 469 ntBASIC15.25■□□□□ 0.03
RAE1P78406 MIR4469-201ENST00000583919 79 ntBASIC15.25■□□□□ 0.03
RAE1P78406 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.25■□□□□ 0.03
RAE1P78406 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAE1P78406 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAE1P78406 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.25■□□□□ 0.03
RAE1P78406 AL513210.1-201ENST00000629608 234 ntBASIC15.25■□□□□ 0.03
RAE1P78406 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.25■□□□□ 0.03
RAE1P78406 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAE1P78406 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAE1P78406 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.25■□□□□ 0.03
RAE1P78406 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
RAE1P78406 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAE1P78406 AC092127.1-201ENST00000567093 3455 ntBASIC15.25■□□□□ 0.03
RAE1P78406 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAE1P78406 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.25■□□□□ 0.03
RAE1P78406 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.25■□□□□ 0.03
RAE1P78406 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAE1P78406 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAE1P78406 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.25■□□□□ 0.03
RAE1P78406 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
RAE1P78406 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.25■□□□□ 0.03
RAE1P78406 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAE1P78406 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAE1P78406 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAE1P78406 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RAE1P78406 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAE1P78406 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.25■□□□□ 0.03
RAE1P78406 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RAE1P78406 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAE1P78406 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.24■□□□□ 0.03
RAE1P78406 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAE1P78406 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.24■□□□□ 0.03
RAE1P78406 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RAE1P78406 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.24■□□□□ 0.03
RAE1P78406 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAE1P78406 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.24■□□□□ 0.03
RAE1P78406 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
RAE1P78406 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAE1P78406 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.24■□□□□ 0.03
RAE1P78406 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAE1P78406 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAE1P78406 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAE1P78406 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RAE1P78406 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAE1P78406 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAE1P78406 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAE1P78406 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAE1P78406 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAE1P78406 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.24■□□□□ 0.03
RAE1P78406 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RAE1P78406 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.24■□□□□ 0.03
RAE1P78406 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAE1P78406 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAE1P78406 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.24■□□□□ 0.03
RAE1P78406 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.24■□□□□ 0.03
RAE1P78406 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.24■□□□□ 0.03
RAE1P78406 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.24■□□□□ 0.03
RAE1P78406 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAE1P78406 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.24■□□□□ 0.03
RAE1P78406 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAE1P78406 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RAE1P78406 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAE1P78406 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAE1P78406 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.24■□□□□ 0.03
RAE1P78406 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RAE1P78406 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RAE1P78406 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAE1P78406 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAE1P78406 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.24■□□□□ 0.03
RAE1P78406 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.24■□□□□ 0.03
RAE1P78406 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAE1P78406 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAE1P78406 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAE1P78406 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAE1P78406 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RAE1P78406 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAE1P78406 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RAE1P78406 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.23■□□□□ 0.03
RAE1P78406 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAE1P78406 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAE1P78406 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RAE1P78406 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAE1P78406 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms