Protein–RNA interactions for Protein: P78364

PHC1, Polyhomeotic-like protein 1, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1P78364 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PHC1P78364 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.4■□□□□ 0.06
PHC1P78364 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PHC1P78364 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PHC1P78364 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
PHC1P78364 CICP13-201ENST00000422015 2789 ntBASIC15.4■□□□□ 0.06
PHC1P78364 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PHC1P78364 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PHC1P78364 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PHC1P78364 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.4■□□□□ 0.06
PHC1P78364 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PHC1P78364 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PHC1P78364 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PHC1P78364 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PHC1P78364 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PHC1P78364 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PHC1P78364 HAUS4P1-201ENST00000406739 1145 ntBASIC15.4■□□□□ 0.06
PHC1P78364 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PHC1P78364 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PHC1P78364 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.4■□□□□ 0.06
PHC1P78364 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.4■□□□□ 0.06
PHC1P78364 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.4■□□□□ 0.06
PHC1P78364 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.4■□□□□ 0.06
PHC1P78364 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.4■□□□□ 0.06
PHC1P78364 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PHC1P78364 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PHC1P78364 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PHC1P78364 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PHC1P78364 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PHC1P78364 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PHC1P78364 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PHC1P78364 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.4■□□□□ 0.06
PHC1P78364 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.4■□□□□ 0.06
PHC1P78364 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PHC1P78364 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
PHC1P78364 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PHC1P78364 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
PHC1P78364 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
PHC1P78364 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.4■□□□□ 0.06
PHC1P78364 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.39■□□□□ 0.06
PHC1P78364 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.39■□□□□ 0.05
PHC1P78364 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
PHC1P78364 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PHC1P78364 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.39■□□□□ 0.05
PHC1P78364 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PHC1P78364 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.39■□□□□ 0.05
PHC1P78364 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
PHC1P78364 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.39■□□□□ 0.05
PHC1P78364 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PHC1P78364 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PHC1P78364 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.39■□□□□ 0.05
PHC1P78364 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PHC1P78364 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PHC1P78364 AL589702.1-201ENST00000641229 1509 ntBASIC15.39■□□□□ 0.05
PHC1P78364 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PHC1P78364 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PHC1P78364 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PHC1P78364 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.39■□□□□ 0.05
PHC1P78364 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.39■□□□□ 0.05
PHC1P78364 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.39■□□□□ 0.05
PHC1P78364 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.39■□□□□ 0.05
PHC1P78364 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.39■□□□□ 0.05
PHC1P78364 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.39■□□□□ 0.05
PHC1P78364 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
PHC1P78364 AC140658.5-201ENST00000438532 169 ntBASIC15.39■□□□□ 0.05
PHC1P78364 KRT18P34-201ENST00000488218 1270 ntBASIC15.39■□□□□ 0.05
PHC1P78364 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PHC1P78364 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.39■□□□□ 0.05
PHC1P78364 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.39■□□□□ 0.05
PHC1P78364 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
PHC1P78364 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.39■□□□□ 0.05
PHC1P78364 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.39■□□□□ 0.05
PHC1P78364 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.39■□□□□ 0.05
PHC1P78364 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.39■□□□□ 0.05
PHC1P78364 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.39■□□□□ 0.05
PHC1P78364 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.39■□□□□ 0.05
PHC1P78364 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.39■□□□□ 0.05
PHC1P78364 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PHC1P78364 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
PHC1P78364 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.39■□□□□ 0.05
PHC1P78364 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PHC1P78364 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PHC1P78364 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PHC1P78364 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PHC1P78364 HLA-A-201ENST00000376802 1334 ntBASIC15.39■□□□□ 0.05
PHC1P78364 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.39■□□□□ 0.05
PHC1P78364 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PHC1P78364 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PHC1P78364 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.39■□□□□ 0.05
PHC1P78364 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PHC1P78364 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PHC1P78364 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PHC1P78364 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PHC1P78364 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PHC1P78364 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
PHC1P78364 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.38■□□□□ 0.05
PHC1P78364 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PHC1P78364 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PHC1P78364 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PHC1P78364 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms