Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RPL39P62891 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RPL39P62891 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
RPL39P62891 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC11.45□□□□□ -0.58
RPL39P62891 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RPL39P62891 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RPL39P62891 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
RPL39P62891 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
RPL39P62891 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RPL39P62891 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RPL39P62891 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC11.45□□□□□ -0.58
RPL39P62891 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC11.45□□□□□ -0.58
RPL39P62891 CNTNAP3P2-201ENST00000617175 3861 ntBASIC11.45□□□□□ -0.58
RPL39P62891 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
RPL39P62891 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC11.45□□□□□ -0.58
RPL39P62891 NUS1P2-201ENST00000417358 873 ntBASIC11.45□□□□□ -0.58
RPL39P62891 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RPL39P62891 BET1L-206ENST00000486280 665 ntTSL 3 BASIC11.45□□□□□ -0.58
RPL39P62891 SLC25A6P2-201ENST00000497974 877 ntBASIC11.45□□□□□ -0.58
RPL39P62891 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
RPL39P62891 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC11.45□□□□□ -0.58
RPL39P62891 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
RPL39P62891 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC11.45□□□□□ -0.58
RPL39P62891 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC11.45□□□□□ -0.58
RPL39P62891 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC11.45□□□□□ -0.58
RPL39P62891 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
RPL39P62891 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
RPL39P62891 AL022326.1-202ENST00000641533 845 ntBASIC11.45□□□□□ -0.58
RPL39P62891 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RPL39P62891 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC11.45□□□□□ -0.58
RPL39P62891 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RPL39P62891 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC11.45□□□□□ -0.58
RPL39P62891 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RPL39P62891 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC11.45□□□□□ -0.58
RPL39P62891 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RPL39P62891 GOLGA8DP-202ENST00000341390 2184 ntBASIC11.45□□□□□ -0.58
RPL39P62891 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RPL39P62891 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC11.45□□□□□ -0.58
RPL39P62891 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RPL39P62891 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
RPL39P62891 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
RPL39P62891 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC11.45□□□□□ -0.58
RPL39P62891 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
RPL39P62891 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RPL39P62891 POR-201ENST00000394893 2532 ntTSL 5 BASIC11.45□□□□□ -0.58
RPL39P62891 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC11.45□□□□□ -0.58
RPL39P62891 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
RPL39P62891 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RPL39P62891 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
RPL39P62891 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
RPL39P62891 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC11.45□□□□□ -0.58
RPL39P62891 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
RPL39P62891 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
RPL39P62891 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
RPL39P62891 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC11.45□□□□□ -0.58
RPL39P62891 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RPL39P62891 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC11.44□□□□□ -0.58
RPL39P62891 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC11.44□□□□□ -0.58
RPL39P62891 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RPL39P62891 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RPL39P62891 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
RPL39P62891 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RPL39P62891 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
RPL39P62891 AP005117.1-201ENST00000584346 1413 ntBASIC11.44□□□□□ -0.58
RPL39P62891 ST20-AS1-201ENST00000560255 4223 ntBASIC11.44□□□□□ -0.58
RPL39P62891 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
RPL39P62891 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
RPL39P62891 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC11.44□□□□□ -0.58
RPL39P62891 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC11.44□□□□□ -0.58
RPL39P62891 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RPL39P62891 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RPL39P62891 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RPL39P62891 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RPL39P62891 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
RPL39P62891 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RPL39P62891 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
RPL39P62891 AC005332.1-201ENST00000577698 1310 ntBASIC11.44□□□□□ -0.58
RPL39P62891 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RPL39P62891 SLC9A3P2-201ENST00000447821 2021 ntBASIC11.44□□□□□ -0.58
RPL39P62891 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RPL39P62891 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RPL39P62891 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RPL39P62891 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC11.44□□□□□ -0.58
RPL39P62891 DPM2-202ENST00000373110 738 ntTSL 2 BASIC11.44□□□□□ -0.58
RPL39P62891 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
RPL39P62891 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
RPL39P62891 STARD13-205ENST00000439831 945 ntTSL 2 BASIC11.44□□□□□ -0.58
RPL39P62891 AP002383.4-201ENST00000442518 975 ntBASIC11.44□□□□□ -0.58
RPL39P62891 DUX4L26-201ENST00000489078 1255 ntBASIC11.44□□□□□ -0.58
RPL39P62891 AC104819.1-201ENST00000504587 486 ntBASIC11.44□□□□□ -0.58
RPL39P62891 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC11.44□□□□□ -0.58
RPL39P62891 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC11.44□□□□□ -0.58
RPL39P62891 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC11.44□□□□□ -0.58
RPL39P62891 MIR5100-201ENST00000579544 119 ntBASIC11.44□□□□□ -0.58
RPL39P62891 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RPL39P62891 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC11.44□□□□□ -0.58
RPL39P62891 AF228730.7-201ENST00000641842 219 ntBASIC11.44□□□□□ -0.58
RPL39P62891 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC11.44□□□□□ -0.58
RPL39P62891 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RPL39P62891 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms