Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC12□□□□□ -0.49
CMC4P56277 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CMC4P56277 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC12□□□□□ -0.49
CMC4P56277 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CMC4P56277 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC12□□□□□ -0.49
CMC4P56277 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC12□□□□□ -0.49
CMC4P56277 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CMC4P56277 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CMC4P56277 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC12□□□□□ -0.49
CMC4P56277 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC11.99□□□□□ -0.49
CMC4P56277 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CMC4P56277 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CMC4P56277 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CMC4P56277 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
CMC4P56277 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
CMC4P56277 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CMC4P56277 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CMC4P56277 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CMC4P56277 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CMC4P56277 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CMC4P56277 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CMC4P56277 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CMC4P56277 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
CMC4P56277 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CMC4P56277 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CMC4P56277 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CMC4P56277 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC11.99□□□□□ -0.49
CMC4P56277 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
CMC4P56277 HLA-DRB6-201ENST00000411500 1235 ntBASIC11.99□□□□□ -0.49
CMC4P56277 ELP6-209ENST00000446787 894 ntTSL 3 BASIC11.99□□□□□ -0.49
CMC4P56277 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC11.99□□□□□ -0.49
CMC4P56277 AL512638.1-201ENST00000457493 794 ntBASIC11.99□□□□□ -0.49
CMC4P56277 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC11.99□□□□□ -0.49
CMC4P56277 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC11.99□□□□□ -0.49
CMC4P56277 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC11.99□□□□□ -0.49
CMC4P56277 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
CMC4P56277 AC093028.1-201ENST00000622998 982 ntBASIC11.99□□□□□ -0.49
CMC4P56277 ORC5-208ENST00000626700 344 ntTSL 3 BASIC11.99□□□□□ -0.49
CMC4P56277 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CMC4P56277 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC11.99□□□□□ -0.49
CMC4P56277 KRT8P12-202ENST00000472924 1397 ntBASIC11.99□□□□□ -0.49
CMC4P56277 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
CMC4P56277 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CMC4P56277 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CMC4P56277 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CMC4P56277 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
CMC4P56277 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC11.99□□□□□ -0.49
CMC4P56277 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CMC4P56277 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
CMC4P56277 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CMC4P56277 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CMC4P56277 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC11.99□□□□□ -0.49
CMC4P56277 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CMC4P56277 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC11.99□□□□□ -0.49
CMC4P56277 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CMC4P56277 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
CMC4P56277 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CMC4P56277 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CMC4P56277 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CMC4P56277 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CMC4P56277 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CMC4P56277 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CMC4P56277 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
CMC4P56277 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CMC4P56277 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC11.98□□□□□ -0.49
CMC4P56277 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CMC4P56277 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
CMC4P56277 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CMC4P56277 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CMC4P56277 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC11.98□□□□□ -0.49
CMC4P56277 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC11.98□□□□□ -0.49
CMC4P56277 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
CMC4P56277 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
CMC4P56277 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
CMC4P56277 AL596087.1-201ENST00000400979 1969 ntBASIC11.98□□□□□ -0.49
CMC4P56277 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CMC4P56277 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC11.98□□□□□ -0.49
CMC4P56277 AC011477.6-201ENST00000604980 1927 ntBASIC11.98□□□□□ -0.49
CMC4P56277 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CMC4P56277 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CMC4P56277 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
CMC4P56277 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC11.98□□□□□ -0.49
CMC4P56277 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CMC4P56277 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
CMC4P56277 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CMC4P56277 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC11.98□□□□□ -0.49
CMC4P56277 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC11.98□□□□□ -0.49
CMC4P56277 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CMC4P56277 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC11.98□□□□□ -0.49
CMC4P56277 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CMC4P56277 FO538757.1-201ENST00000623083 1397 ntBASIC11.98□□□□□ -0.49
CMC4P56277 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC11.98□□□□□ -0.49
CMC4P56277 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
CMC4P56277 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CMC4P56277 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
CMC4P56277 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
CMC4P56277 BASP1P1-201ENST00000430708 665 ntBASIC11.98□□□□□ -0.49
CMC4P56277 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CMC4P56277 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC11.98□□□□□ -0.49
CMC4P56277 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms