Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.42■□□□□ 0.22
CDH4P55283 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CDH4P55283 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH4P55283 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH4P55283 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH4P55283 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH4P55283 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CDH4P55283 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.41■□□□□ 0.22
CDH4P55283 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH4P55283 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDH4P55283 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH4P55283 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH4P55283 AZGP1P1-201ENST00000411909 902 ntBASIC16.41■□□□□ 0.22
CDH4P55283 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.41■□□□□ 0.22
CDH4P55283 FAM8A3P-201ENST00000427218 844 ntBASIC16.41■□□□□ 0.22
CDH4P55283 UGT1A2P-201ENST00000454886 866 ntBASIC16.41■□□□□ 0.22
CDH4P55283 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.41■□□□□ 0.22
CDH4P55283 SDHAP3-202ENST00000515467 728 ntBASIC16.41■□□□□ 0.22
CDH4P55283 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.41■□□□□ 0.22
CDH4P55283 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CDH4P55283 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.41■□□□□ 0.22
CDH4P55283 AC092364.2-202ENST00000597012 1073 ntBASIC16.41■□□□□ 0.22
CDH4P55283 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDH4P55283 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.41■□□□□ 0.22
CDH4P55283 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH4P55283 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH4P55283 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.41■□□□□ 0.22
CDH4P55283 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDH4P55283 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.41■□□□□ 0.22
CDH4P55283 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH4P55283 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDH4P55283 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH4P55283 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH4P55283 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH4P55283 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CDH4P55283 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.41■□□□□ 0.22
CDH4P55283 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDH4P55283 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CDH4P55283 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH4P55283 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDH4P55283 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDH4P55283 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.4■□□□□ 0.22
CDH4P55283 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CDH4P55283 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDH4P55283 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDH4P55283 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.4■□□□□ 0.22
CDH4P55283 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.4■□□□□ 0.22
CDH4P55283 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDH4P55283 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
CDH4P55283 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CDH4P55283 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDH4P55283 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH4P55283 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH4P55283 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH4P55283 CDC14C-201ENST00000428251 1719 ntBASIC16.4■□□□□ 0.22
CDH4P55283 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDH4P55283 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDH4P55283 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDH4P55283 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH4P55283 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH4P55283 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDH4P55283 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.4■□□□□ 0.22
CDH4P55283 TSPY16P-201ENST00000449843 468 ntBASIC16.4■□□□□ 0.22
CDH4P55283 PHKG1P2-201ENST00000457537 863 ntBASIC16.4■□□□□ 0.22
CDH4P55283 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.4■□□□□ 0.22
CDH4P55283 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDH4P55283 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CDH4P55283 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.4■□□□□ 0.22
CDH4P55283 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.4■□□□□ 0.22
CDH4P55283 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.4■□□□□ 0.22
CDH4P55283 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH4P55283 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH4P55283 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.4■□□□□ 0.22
CDH4P55283 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CDH4P55283 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH4P55283 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.4■□□□□ 0.22
CDH4P55283 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.4■□□□□ 0.22
CDH4P55283 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.4■□□□□ 0.22
CDH4P55283 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH4P55283 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH4P55283 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.4■□□□□ 0.22
CDH4P55283 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.4■□□□□ 0.22
CDH4P55283 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.4■□□□□ 0.22
CDH4P55283 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDH4P55283 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CDH4P55283 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.4■□□□□ 0.22
CDH4P55283 AC124067.4-201ENST00000519691 2379 ntBASIC16.4■□□□□ 0.22
CDH4P55283 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH4P55283 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.39■□□□□ 0.21
CDH4P55283 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.39■□□□□ 0.21
CDH4P55283 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH4P55283 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH4P55283 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH4P55283 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CDH4P55283 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH4P55283 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH4P55283 LINC02447-202ENST00000501888 2146 ntBASIC16.39■□□□□ 0.21
CDH4P55283 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH4P55283 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH4P55283 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms