Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATP1B3P54709 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.05□□□□□ -0.16
ATP1B3P54709 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.05□□□□□ -0.16
ATP1B3P54709 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATP1B3P54709 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
ATP1B3P54709 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATP1B3P54709 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.05□□□□□ -0.16
ATP1B3P54709 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ATP1B3P54709 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ATP1B3P54709 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATP1B3P54709 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.05□□□□□ -0.16
ATP1B3P54709 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATP1B3P54709 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
ATP1B3P54709 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ATP1B3P54709 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATP1B3P54709 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ATP1B3P54709 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
ATP1B3P54709 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ATP1B3P54709 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.05□□□□□ -0.16
ATP1B3P54709 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.05□□□□□ -0.16
ATP1B3P54709 UNC93B6-202ENST00000528242 690 ntBASIC14.05□□□□□ -0.16
ATP1B3P54709 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
ATP1B3P54709 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.05□□□□□ -0.16
ATP1B3P54709 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.05□□□□□ -0.16
ATP1B3P54709 AP001005.1-201ENST00000571755 1248 ntBASIC14.05□□□□□ -0.16
ATP1B3P54709 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.05□□□□□ -0.16
ATP1B3P54709 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.05□□□□□ -0.16
ATP1B3P54709 MIR7706-201ENST00000613747 67 ntBASIC14.05□□□□□ -0.16
ATP1B3P54709 AC116407.3-201ENST00000623905 1129 ntBASIC14.05□□□□□ -0.16
ATP1B3P54709 AC007064.4-201ENST00000637740 555 ntBASIC14.05□□□□□ -0.16
ATP1B3P54709 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATP1B3P54709 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATP1B3P54709 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.05□□□□□ -0.16
ATP1B3P54709 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATP1B3P54709 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
ATP1B3P54709 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.05□□□□□ -0.16
ATP1B3P54709 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
ATP1B3P54709 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATP1B3P54709 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATP1B3P54709 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ATP1B3P54709 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATP1B3P54709 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
ATP1B3P54709 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ATP1B3P54709 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATP1B3P54709 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.05□□□□□ -0.16
ATP1B3P54709 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.05□□□□□ -0.16
ATP1B3P54709 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATP1B3P54709 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.05□□□□□ -0.16
ATP1B3P54709 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ATP1B3P54709 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.05□□□□□ -0.16
ATP1B3P54709 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATP1B3P54709 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATP1B3P54709 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ATP1B3P54709 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.05□□□□□ -0.16
ATP1B3P54709 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.04□□□□□ -0.16
ATP1B3P54709 AC006058.4-201ENST00000624016 1670 ntBASIC14.04□□□□□ -0.16
ATP1B3P54709 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATP1B3P54709 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.04□□□□□ -0.16
ATP1B3P54709 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ATP1B3P54709 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
ATP1B3P54709 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATP1B3P54709 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATP1B3P54709 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATP1B3P54709 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATP1B3P54709 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATP1B3P54709 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ATP1B3P54709 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATP1B3P54709 AC009947.1-201ENST00000444350 727 ntBASIC14.04□□□□□ -0.16
ATP1B3P54709 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.04□□□□□ -0.16
ATP1B3P54709 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
ATP1B3P54709 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATP1B3P54709 AL049840.3-201ENST00000602669 611 ntBASIC14.04□□□□□ -0.16
ATP1B3P54709 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.04□□□□□ -0.16
ATP1B3P54709 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.04□□□□□ -0.16
ATP1B3P54709 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.04□□□□□ -0.16
ATP1B3P54709 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATP1B3P54709 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATP1B3P54709 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATP1B3P54709 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.04□□□□□ -0.16
ATP1B3P54709 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.04□□□□□ -0.16
ATP1B3P54709 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATP1B3P54709 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATP1B3P54709 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
ATP1B3P54709 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATP1B3P54709 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.04□□□□□ -0.16
ATP1B3P54709 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
ATP1B3P54709 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
ATP1B3P54709 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.04□□□□□ -0.16
ATP1B3P54709 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
ATP1B3P54709 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
ATP1B3P54709 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ATP1B3P54709 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
ATP1B3P54709 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.03□□□□□ -0.16
ATP1B3P54709 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
ATP1B3P54709 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATP1B3P54709 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATP1B3P54709 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
ATP1B3P54709 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.03□□□□□ -0.16
ATP1B3P54709 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
ATP1B3P54709 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms