Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.09■□□□□ 0.33
CACNA2D1P54289 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNA2D1P54289 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNA2D1P54289 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.09■□□□□ 0.33
CACNA2D1P54289 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
CACNA2D1P54289 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CACNA2D1P54289 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CACNA2D1P54289 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.09■□□□□ 0.33
CACNA2D1P54289 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNA2D1P54289 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CACNA2D1P54289 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.09■□□□□ 0.33
CACNA2D1P54289 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.09■□□□□ 0.33
CACNA2D1P54289 TSPY26P-202ENST00000565928 3884 ntBASIC17.08■□□□□ 0.33
CACNA2D1P54289 AC132872.4-202ENST00000622924 2756 ntBASIC17.08■□□□□ 0.33
CACNA2D1P54289 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.08■□□□□ 0.33
CACNA2D1P54289 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CACNA2D1P54289 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CACNA2D1P54289 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CACNA2D1P54289 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
CACNA2D1P54289 CETN4P-206ENST00000642099 2168 ntBASIC17.08■□□□□ 0.33
CACNA2D1P54289 AC026691.1-201ENST00000602502 2017 ntBASIC17.08■□□□□ 0.33
CACNA2D1P54289 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CACNA2D1P54289 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.08■□□□□ 0.33
CACNA2D1P54289 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CACNA2D1P54289 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.08■□□□□ 0.33
CACNA2D1P54289 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.32
CACNA2D1P54289 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.08■□□□□ 0.32
CACNA2D1P54289 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.08■□□□□ 0.32
CACNA2D1P54289 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.08■□□□□ 0.32
CACNA2D1P54289 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CACNA2D1P54289 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.08■□□□□ 0.32
CACNA2D1P54289 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.08■□□□□ 0.32
CACNA2D1P54289 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CACNA2D1P54289 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.08■□□□□ 0.32
CACNA2D1P54289 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CACNA2D1P54289 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.08■□□□□ 0.32
CACNA2D1P54289 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.08■□□□□ 0.32
CACNA2D1P54289 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CACNA2D1P54289 INGX-202ENST00000489074 768 ntBASIC17.08■□□□□ 0.32
CACNA2D1P54289 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.08■□□□□ 0.32
CACNA2D1P54289 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.08■□□□□ 0.32
CACNA2D1P54289 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CACNA2D1P54289 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.08■□□□□ 0.32
CACNA2D1P54289 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.08■□□□□ 0.32
CACNA2D1P54289 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.08■□□□□ 0.32
CACNA2D1P54289 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CACNA2D1P54289 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CACNA2D1P54289 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.08■□□□□ 0.32
CACNA2D1P54289 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.08■□□□□ 0.32
CACNA2D1P54289 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CACNA2D1P54289 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CACNA2D1P54289 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CACNA2D1P54289 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CACNA2D1P54289 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CACNA2D1P54289 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.07■□□□□ 0.32
CACNA2D1P54289 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CACNA2D1P54289 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
CACNA2D1P54289 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
CACNA2D1P54289 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
CACNA2D1P54289 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CACNA2D1P54289 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CACNA2D1P54289 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CACNA2D1P54289 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CACNA2D1P54289 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CACNA2D1P54289 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.07■□□□□ 0.32
CACNA2D1P54289 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.07■□□□□ 0.32
CACNA2D1P54289 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.07■□□□□ 0.32
CACNA2D1P54289 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CACNA2D1P54289 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CACNA2D1P54289 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.07■□□□□ 0.32
CACNA2D1P54289 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CACNA2D1P54289 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CACNA2D1P54289 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.07■□□□□ 0.32
CACNA2D1P54289 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CACNA2D1P54289 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.07■□□□□ 0.32
CACNA2D1P54289 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.07■□□□□ 0.32
CACNA2D1P54289 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.07■□□□□ 0.32
CACNA2D1P54289 RNA5SP421-201ENST00000516864 134 ntBASIC17.07■□□□□ 0.32
CACNA2D1P54289 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.07■□□□□ 0.32
CACNA2D1P54289 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CACNA2D1P54289 AL365330.1-201ENST00000607459 531 ntBASIC17.07■□□□□ 0.32
CACNA2D1P54289 AL844908.2-201ENST00000609461 460 ntBASIC17.07■□□□□ 0.32
CACNA2D1P54289 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
CACNA2D1P54289 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CACNA2D1P54289 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CACNA2D1P54289 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CACNA2D1P54289 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CACNA2D1P54289 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.07■□□□□ 0.32
CACNA2D1P54289 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CACNA2D1P54289 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.07■□□□□ 0.32
CACNA2D1P54289 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.07■□□□□ 0.32
CACNA2D1P54289 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.07■□□□□ 0.32
CACNA2D1P54289 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CACNA2D1P54289 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CACNA2D1P54289 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CACNA2D1P54289 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CACNA2D1P54289 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CACNA2D1P54289 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CACNA2D1P54289 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CACNA2D1P54289 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms