Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF144AP50876 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.04■□□□□ -0
RNF144AP50876 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF144AP50876 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
RNF144AP50876 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.04■□□□□ -0
RNF144AP50876 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
RNF144AP50876 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF144AP50876 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.04■□□□□ -0
RNF144AP50876 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.04■□□□□ -0
RNF144AP50876 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
RNF144AP50876 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF144AP50876 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.04■□□□□ -0
RNF144AP50876 AL592424.1-201ENST00000563624 1536 ntBASIC15.04■□□□□ -0
RNF144AP50876 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.04■□□□□ -0
RNF144AP50876 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
RNF144AP50876 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.04■□□□□ -0
RNF144AP50876 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF144AP50876 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
RNF144AP50876 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.04■□□□□ -0
RNF144AP50876 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF144AP50876 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF144AP50876 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF144AP50876 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF144AP50876 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF144AP50876 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.04■□□□□ -0
RNF144AP50876 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.04■□□□□ -0
RNF144AP50876 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.04■□□□□ -0
RNF144AP50876 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.04■□□□□ -0
RNF144AP50876 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.04■□□□□ -0
RNF144AP50876 RARRES2P8-201ENST00000566335 367 ntBASIC15.04■□□□□ -0
RNF144AP50876 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.04■□□□□ -0
RNF144AP50876 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.04■□□□□ -0
RNF144AP50876 AC068587.6-202ENST00000641839 5619 ntBASIC15.04■□□□□ -0
RNF144AP50876 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.04■□□□□ -0
RNF144AP50876 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF144AP50876 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
RNF144AP50876 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF144AP50876 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF144AP50876 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
RNF144AP50876 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
RNF144AP50876 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF144AP50876 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF144AP50876 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.04■□□□□ -0
RNF144AP50876 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF144AP50876 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.04■□□□□ -0
RNF144AP50876 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF144AP50876 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RNF144AP50876 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
RNF144AP50876 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RNF144AP50876 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
RNF144AP50876 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
RNF144AP50876 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.03■□□□□ -0
RNF144AP50876 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RNF144AP50876 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.03■□□□□ -0
RNF144AP50876 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.03■□□□□ -0
RNF144AP50876 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RNF144AP50876 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.03■□□□□ -0
RNF144AP50876 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
RNF144AP50876 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RNF144AP50876 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RNF144AP50876 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.03■□□□□ -0
RNF144AP50876 TFAMP1-201ENST00000412727 736 ntBASIC15.03■□□□□ -0
RNF144AP50876 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.03■□□□□ -0
RNF144AP50876 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
RNF144AP50876 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.03■□□□□ -0
RNF144AP50876 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.03■□□□□ -0
RNF144AP50876 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.03■□□□□ -0
RNF144AP50876 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.03■□□□□ -0
RNF144AP50876 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.03■□□□□ -0
RNF144AP50876 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.03■□□□□ -0
RNF144AP50876 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.03■□□□□ -0
RNF144AP50876 AL161645.1-201ENST00000622716 1255 ntBASIC15.03■□□□□ -0
RNF144AP50876 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RNF144AP50876 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RNF144AP50876 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.03■□□□□ -0
RNF144AP50876 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.03■□□□□ -0
RNF144AP50876 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
RNF144AP50876 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
RNF144AP50876 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
RNF144AP50876 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
RNF144AP50876 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RNF144AP50876 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RNF144AP50876 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
RNF144AP50876 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.02■□□□□ -0
RNF144AP50876 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.02■□□□□ -0
RNF144AP50876 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.02■□□□□ -0
RNF144AP50876 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RNF144AP50876 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RNF144AP50876 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.02■□□□□ -0
RNF144AP50876 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
RNF144AP50876 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.02■□□□□ -0
RNF144AP50876 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.02■□□□□ -0
RNF144AP50876 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
RNF144AP50876 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RNF144AP50876 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
RNF144AP50876 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.02■□□□□ -0
RNF144AP50876 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
RNF144AP50876 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RNF144AP50876 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.02■□□□□ -0
RNF144AP50876 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms