Protein–RNA interactions for Protein: P43004

SLC1A2, Excitatory amino acid transporter 2, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A2P43004 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A2P43004 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC1A2P43004 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A2P43004 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A2P43004 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SLC1A2P43004 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A2P43004 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.06■□□□□ 0.16
SLC1A2P43004 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A2P43004 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC1A2P43004 AC004832.2-201ENST00000426397 482 ntBASIC16.06■□□□□ 0.16
SLC1A2P43004 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SLC1A2P43004 ALG1L5P-201ENST00000482043 771 ntBASIC16.06■□□□□ 0.16
SLC1A2P43004 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.06■□□□□ 0.16
SLC1A2P43004 AC079140.1-201ENST00000508039 487 ntBASIC16.06■□□□□ 0.16
SLC1A2P43004 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A2P43004 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC1A2P43004 AP000842.3-202ENST00000569238 1080 ntBASIC16.06■□□□□ 0.16
SLC1A2P43004 AC024267.1-201ENST00000582320 895 ntBASIC16.06■□□□□ 0.16
SLC1A2P43004 AL671883.3-201ENST00000603274 991 ntBASIC16.06■□□□□ 0.16
SLC1A2P43004 AC026120.1-201ENST00000611536 926 ntBASIC16.06■□□□□ 0.16
SLC1A2P43004 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.06■□□□□ 0.16
SLC1A2P43004 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.06■□□□□ 0.16
SLC1A2P43004 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A2P43004 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A2P43004 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A2P43004 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A2P43004 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A2P43004 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A2P43004 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
SLC1A2P43004 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A2P43004 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A2P43004 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A2P43004 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC1A2P43004 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC1A2P43004 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC1A2P43004 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC1A2P43004 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A2P43004 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A2P43004 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A2P43004 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A2P43004 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SLC1A2P43004 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SLC1A2P43004 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A2P43004 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A2P43004 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC1A2P43004 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
SLC1A2P43004 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A2P43004 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A2P43004 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A2P43004 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC1A2P43004 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A2P43004 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.05■□□□□ 0.16
SLC1A2P43004 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC1A2P43004 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A2P43004 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A2P43004 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SLC1A2P43004 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A2P43004 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC1A2P43004 TIMM8BP1-201ENST00000452384 211 ntBASIC16.05■□□□□ 0.16
SLC1A2P43004 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.05■□□□□ 0.16
SLC1A2P43004 RNA5SP410-201ENST00000516285 106 ntBASIC16.05■□□□□ 0.16
SLC1A2P43004 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC1A2P43004 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC1A2P43004 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC1A2P43004 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.05■□□□□ 0.16
SLC1A2P43004 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.05■□□□□ 0.16
SLC1A2P43004 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC1A2P43004 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A2P43004 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.05■□□□□ 0.16
SLC1A2P43004 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC1A2P43004 C20orf181-201ENST00000623918 480 ntBASIC16.05■□□□□ 0.16
SLC1A2P43004 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC1A2P43004 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A2P43004 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A2P43004 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
SLC1A2P43004 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SLC1A2P43004 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC1A2P43004 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC1A2P43004 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SLC1A2P43004 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC1A2P43004 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC1A2P43004 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC1A2P43004 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A2P43004 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A2P43004 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A2P43004 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC1A2P43004 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A2P43004 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.04■□□□□ 0.16
SLC1A2P43004 AC144831.1-201ENST00000573312 2656 ntBASIC16.04■□□□□ 0.16
SLC1A2P43004 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC1A2P43004 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
SLC1A2P43004 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A2P43004 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A2P43004 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A2P43004 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
SLC1A2P43004 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SLC1A2P43004 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A2P43004 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC1A2P43004 PPT1-215ENST00000641471 2368 ntBASIC16.04■□□□□ 0.16
SLC1A2P43004 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms