Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.2□□□□□ -0.3
CEACAM3P40198 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.2□□□□□ -0.3
CEACAM3P40198 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CEACAM3P40198 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CEACAM3P40198 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CEACAM3P40198 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CEACAM3P40198 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.2□□□□□ -0.3
CEACAM3P40198 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CEACAM3P40198 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
CEACAM3P40198 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.2□□□□□ -0.3
CEACAM3P40198 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CEACAM3P40198 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CEACAM3P40198 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CEACAM3P40198 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CEACAM3P40198 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.19□□□□□ -0.3
CEACAM3P40198 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
CEACAM3P40198 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CEACAM3P40198 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CEACAM3P40198 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.19□□□□□ -0.3
CEACAM3P40198 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
CEACAM3P40198 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.19□□□□□ -0.3
CEACAM3P40198 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CEACAM3P40198 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CEACAM3P40198 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
CEACAM3P40198 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CEACAM3P40198 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CEACAM3P40198 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CEACAM3P40198 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CEACAM3P40198 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
CEACAM3P40198 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CEACAM3P40198 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CEACAM3P40198 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CEACAM3P40198 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.19□□□□□ -0.3
CEACAM3P40198 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CEACAM3P40198 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CEACAM3P40198 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CEACAM3P40198 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CEACAM3P40198 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.19□□□□□ -0.3
CEACAM3P40198 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.19□□□□□ -0.3
CEACAM3P40198 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CEACAM3P40198 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
CEACAM3P40198 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CEACAM3P40198 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CEACAM3P40198 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.19□□□□□ -0.3
CEACAM3P40198 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.19□□□□□ -0.3
CEACAM3P40198 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
CEACAM3P40198 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.19□□□□□ -0.3
CEACAM3P40198 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.19□□□□□ -0.3
CEACAM3P40198 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.19□□□□□ -0.3
CEACAM3P40198 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.19□□□□□ -0.3
CEACAM3P40198 AC025678.2-201ENST00000562061 970 ntBASIC13.19□□□□□ -0.3
CEACAM3P40198 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CEACAM3P40198 RARRES2P9-201ENST00000565168 469 ntBASIC13.19□□□□□ -0.3
CEACAM3P40198 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.19□□□□□ -0.3
CEACAM3P40198 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.19□□□□□ -0.3
CEACAM3P40198 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CEACAM3P40198 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CEACAM3P40198 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC13.19□□□□□ -0.3
CEACAM3P40198 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.19□□□□□ -0.3
CEACAM3P40198 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CEACAM3P40198 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CEACAM3P40198 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CEACAM3P40198 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CEACAM3P40198 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CEACAM3P40198 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CEACAM3P40198 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CEACAM3P40198 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CEACAM3P40198 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.19□□□□□ -0.3
CEACAM3P40198 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CEACAM3P40198 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.19□□□□□ -0.3
CEACAM3P40198 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC13.19□□□□□ -0.3
CEACAM3P40198 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CEACAM3P40198 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CEACAM3P40198 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CEACAM3P40198 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CEACAM3P40198 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CEACAM3P40198 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.19□□□□□ -0.3
CEACAM3P40198 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CEACAM3P40198 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CEACAM3P40198 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CEACAM3P40198 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CEACAM3P40198 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CEACAM3P40198 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CEACAM3P40198 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13.18□□□□□ -0.3
CEACAM3P40198 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC13.18□□□□□ -0.3
CEACAM3P40198 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CEACAM3P40198 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.18□□□□□ -0.3
CEACAM3P40198 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.18□□□□□ -0.3
CEACAM3P40198 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CEACAM3P40198 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.18□□□□□ -0.3
CEACAM3P40198 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.18□□□□□ -0.3
CEACAM3P40198 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CEACAM3P40198 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CEACAM3P40198 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CEACAM3P40198 AC006449.5-201ENST00000610658 2098 ntBASIC13.18□□□□□ -0.3
CEACAM3P40198 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CEACAM3P40198 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CEACAM3P40198 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.18□□□□□ -0.3
CEACAM3P40198 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.18□□□□□ -0.3
CEACAM3P40198 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms