Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC13.34□□□□□ -0.27
SNCAP37840 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC13.34□□□□□ -0.27
SNCAP37840 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC13.34□□□□□ -0.27
SNCAP37840 AP001269.4-201ENST00000609611 512 ntBASIC13.34□□□□□ -0.27
SNCAP37840 NPAP1P7-201ENST00000613027 823 ntBASIC13.34□□□□□ -0.27
SNCAP37840 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC13.34□□□□□ -0.27
SNCAP37840 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
SNCAP37840 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SNCAP37840 AL358472.4-201ENST00000633140 710 ntBASIC13.34□□□□□ -0.27
SNCAP37840 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
SNCAP37840 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNCAP37840 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNCAP37840 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.34□□□□□ -0.27
SNCAP37840 LINC02447-202ENST00000501888 2146 ntBASIC13.34□□□□□ -0.27
SNCAP37840 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SNCAP37840 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SNCAP37840 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.34□□□□□ -0.27
SNCAP37840 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNCAP37840 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNCAP37840 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNCAP37840 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNCAP37840 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SNCAP37840 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNCAP37840 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SNCAP37840 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.33□□□□□ -0.27
SNCAP37840 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
SNCAP37840 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
SNCAP37840 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SNCAP37840 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SNCAP37840 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
SNCAP37840 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNCAP37840 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNCAP37840 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.33□□□□□ -0.28
SNCAP37840 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.33□□□□□ -0.28
SNCAP37840 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNCAP37840 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNCAP37840 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNCAP37840 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNCAP37840 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNCAP37840 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNCAP37840 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
SNCAP37840 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNCAP37840 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNCAP37840 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNCAP37840 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SNCAP37840 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNCAP37840 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SNCAP37840 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNCAP37840 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SNCAP37840 AC106795.1-205ENST00000512851 1056 ntBASIC13.33□□□□□ -0.28
SNCAP37840 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.33□□□□□ -0.28
SNCAP37840 AC139887.3-201ENST00000568585 713 ntBASIC13.33□□□□□ -0.28
SNCAP37840 NKAPP1-205ENST00000585790 367 ntBASIC13.33□□□□□ -0.28
SNCAP37840 AL139424.1-201ENST00000607572 797 ntBASIC13.33□□□□□ -0.28
SNCAP37840 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.33□□□□□ -0.28
SNCAP37840 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SNCAP37840 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC13.33□□□□□ -0.28
SNCAP37840 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.33□□□□□ -0.28
SNCAP37840 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC13.33□□□□□ -0.28
SNCAP37840 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.33□□□□□ -0.28
SNCAP37840 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNCAP37840 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SNCAP37840 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNCAP37840 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNCAP37840 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNCAP37840 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.33□□□□□ -0.28
SNCAP37840 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNCAP37840 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SNCAP37840 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
SNCAP37840 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNCAP37840 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
SNCAP37840 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
SNCAP37840 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.32□□□□□ -0.28
SNCAP37840 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNCAP37840 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
SNCAP37840 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNCAP37840 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
SNCAP37840 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SNCAP37840 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.32□□□□□ -0.28
SNCAP37840 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNCAP37840 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SNCAP37840 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNCAP37840 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SNCAP37840 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SNCAP37840 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNCAP37840 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.32□□□□□ -0.28
SNCAP37840 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNCAP37840 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNCAP37840 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNCAP37840 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNCAP37840 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SNCAP37840 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SNCAP37840 COPS8-203ENST00000409334 794 ntTSL 5 BASIC13.32□□□□□ -0.28
SNCAP37840 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC13.32□□□□□ -0.28
SNCAP37840 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC13.32□□□□□ -0.28
SNCAP37840 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
SNCAP37840 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC13.32□□□□□ -0.28
SNCAP37840 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.32□□□□□ -0.28
SNCAP37840 AC093458.2-201ENST00000623150 629 ntBASIC13.32□□□□□ -0.28
SNCAP37840 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms