Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
THBS4P35443 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
THBS4P35443 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
THBS4P35443 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
THBS4P35443 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.22□□□□□ -0.13
THBS4P35443 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.22□□□□□ -0.13
THBS4P35443 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
THBS4P35443 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
THBS4P35443 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
THBS4P35443 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
THBS4P35443 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
THBS4P35443 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.22□□□□□ -0.13
THBS4P35443 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.22□□□□□ -0.13
THBS4P35443 AC027796.2-201ENST00000575326 344 ntBASIC14.22□□□□□ -0.13
THBS4P35443 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.22□□□□□ -0.13
THBS4P35443 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.22□□□□□ -0.13
THBS4P35443 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.22□□□□□ -0.13
THBS4P35443 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
THBS4P35443 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
THBS4P35443 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
THBS4P35443 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
THBS4P35443 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
THBS4P35443 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
THBS4P35443 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
THBS4P35443 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
THBS4P35443 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
THBS4P35443 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
THBS4P35443 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
THBS4P35443 AC005622.1-201ENST00000636801 1703 ntBASIC14.21□□□□□ -0.13
THBS4P35443 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
THBS4P35443 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
THBS4P35443 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
THBS4P35443 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
THBS4P35443 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.21□□□□□ -0.13
THBS4P35443 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
THBS4P35443 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
THBS4P35443 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
THBS4P35443 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
THBS4P35443 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
THBS4P35443 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.21□□□□□ -0.13
THBS4P35443 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
THBS4P35443 HYMAI-201ENST00000635591 3347 ntBASIC14.21□□□□□ -0.13
THBS4P35443 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
THBS4P35443 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
THBS4P35443 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
THBS4P35443 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
THBS4P35443 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
THBS4P35443 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
THBS4P35443 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.21□□□□□ -0.13
THBS4P35443 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
THBS4P35443 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.21□□□□□ -0.13
THBS4P35443 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.21□□□□□ -0.13
THBS4P35443 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.21□□□□□ -0.13
THBS4P35443 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.21□□□□□ -0.13
THBS4P35443 AL645939.2-201ENST00000427340 991 ntBASIC14.21□□□□□ -0.13
THBS4P35443 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.21□□□□□ -0.13
THBS4P35443 RBPMS2P1-201ENST00000437762 623 ntBASIC14.21□□□□□ -0.13
THBS4P35443 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.21□□□□□ -0.13
THBS4P35443 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.21□□□□□ -0.13
THBS4P35443 SLC25A39P2-201ENST00000537614 270 ntBASIC14.21□□□□□ -0.13
THBS4P35443 AC025678.2-201ENST00000562061 970 ntBASIC14.21□□□□□ -0.13
THBS4P35443 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.21□□□□□ -0.13
THBS4P35443 AP000842.3-202ENST00000569238 1080 ntBASIC14.21□□□□□ -0.13
THBS4P35443 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.21□□□□□ -0.13
THBS4P35443 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.21□□□□□ -0.13
THBS4P35443 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
THBS4P35443 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
THBS4P35443 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
THBS4P35443 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.21□□□□□ -0.13
THBS4P35443 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
THBS4P35443 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
THBS4P35443 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
THBS4P35443 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.21□□□□□ -0.13
THBS4P35443 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.21□□□□□ -0.13
THBS4P35443 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
THBS4P35443 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.21□□□□□ -0.13
THBS4P35443 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
THBS4P35443 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
THBS4P35443 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
THBS4P35443 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
THBS4P35443 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
THBS4P35443 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
THBS4P35443 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
THBS4P35443 CDC14C-201ENST00000428251 1719 ntBASIC14.21□□□□□ -0.14
THBS4P35443 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
THBS4P35443 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
THBS4P35443 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
THBS4P35443 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
THBS4P35443 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
THBS4P35443 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
THBS4P35443 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
THBS4P35443 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
THBS4P35443 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
THBS4P35443 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
THBS4P35443 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.2□□□□□ -0.14
THBS4P35443 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
THBS4P35443 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
THBS4P35443 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
THBS4P35443 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
THBS4P35443 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms