Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
BCKDHBP21953 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
BCKDHBP21953 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
BCKDHBP21953 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.8■□□□□ 0.12
BCKDHBP21953 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.8■□□□□ 0.12
BCKDHBP21953 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BCKDHBP21953 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BCKDHBP21953 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
BCKDHBP21953 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
BCKDHBP21953 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
BCKDHBP21953 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.79■□□□□ 0.12
BCKDHBP21953 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.79■□□□□ 0.12
BCKDHBP21953 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
BCKDHBP21953 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
BCKDHBP21953 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
BCKDHBP21953 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BCKDHBP21953 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
BCKDHBP21953 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BCKDHBP21953 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
BCKDHBP21953 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BCKDHBP21953 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
BCKDHBP21953 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
BCKDHBP21953 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.79■□□□□ 0.12
BCKDHBP21953 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BCKDHBP21953 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
BCKDHBP21953 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.79■□□□□ 0.12
BCKDHBP21953 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BCKDHBP21953 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BCKDHBP21953 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.79■□□□□ 0.12
BCKDHBP21953 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
BCKDHBP21953 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.79■□□□□ 0.12
BCKDHBP21953 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.79■□□□□ 0.12
BCKDHBP21953 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
BCKDHBP21953 AC106760.1-201ENST00000508690 800 ntBASIC15.79■□□□□ 0.12
BCKDHBP21953 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.79■□□□□ 0.12
BCKDHBP21953 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.79■□□□□ 0.12
BCKDHBP21953 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.79■□□□□ 0.12
BCKDHBP21953 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
BCKDHBP21953 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
BCKDHBP21953 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
BCKDHBP21953 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
BCKDHBP21953 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.79■□□□□ 0.12
BCKDHBP21953 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
BCKDHBP21953 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
BCKDHBP21953 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BCKDHBP21953 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.79■□□□□ 0.12
BCKDHBP21953 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.79■□□□□ 0.12
BCKDHBP21953 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
BCKDHBP21953 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.79■□□□□ 0.12
BCKDHBP21953 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BCKDHBP21953 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.79■□□□□ 0.12
BCKDHBP21953 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.78■□□□□ 0.12
BCKDHBP21953 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
BCKDHBP21953 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.78■□□□□ 0.12
BCKDHBP21953 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
BCKDHBP21953 RNF216P1-203ENST00000404404 2427 ntBASIC15.78■□□□□ 0.12
BCKDHBP21953 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
BCKDHBP21953 HLA-A-202ENST00000376806 1854 ntBASIC15.78■□□□□ 0.12
BCKDHBP21953 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
BCKDHBP21953 AC105020.1-201ENST00000435356 2205 ntBASIC15.78■□□□□ 0.12
BCKDHBP21953 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
BCKDHBP21953 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
BCKDHBP21953 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
BCKDHBP21953 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
BCKDHBP21953 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
BCKDHBP21953 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
BCKDHBP21953 BAATP1-201ENST00000412284 1225 ntBASIC15.78■□□□□ 0.12
BCKDHBP21953 TOMM22P5-201ENST00000416399 439 ntBASIC15.78■□□□□ 0.12
BCKDHBP21953 AC026954.1-201ENST00000429771 1293 ntBASIC15.78■□□□□ 0.12
BCKDHBP21953 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.78■□□□□ 0.12
BCKDHBP21953 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.78■□□□□ 0.12
BCKDHBP21953 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.78■□□□□ 0.12
BCKDHBP21953 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.78■□□□□ 0.12
BCKDHBP21953 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.78■□□□□ 0.12
BCKDHBP21953 AC103810.3-201ENST00000583567 96 ntBASIC15.78■□□□□ 0.12
BCKDHBP21953 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
BCKDHBP21953 AC243960.2-201ENST00000600996 747 ntBASIC15.78■□□□□ 0.12
BCKDHBP21953 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.78■□□□□ 0.12
BCKDHBP21953 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
BCKDHBP21953 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
BCKDHBP21953 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.78■□□□□ 0.12
BCKDHBP21953 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
BCKDHBP21953 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
BCKDHBP21953 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
BCKDHBP21953 AL592424.1-201ENST00000563624 1536 ntBASIC15.78■□□□□ 0.12
BCKDHBP21953 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
BCKDHBP21953 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
BCKDHBP21953 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
BCKDHBP21953 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.78■□□□□ 0.12
BCKDHBP21953 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
BCKDHBP21953 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
BCKDHBP21953 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
BCKDHBP21953 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
BCKDHBP21953 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
BCKDHBP21953 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
BCKDHBP21953 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
BCKDHBP21953 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
BCKDHBP21953 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
BCKDHBP21953 AC134312.5-201ENST00000568031 1313 ntBASIC15.77■□□□□ 0.12
BCKDHBP21953 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms