Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.57■□□□□ 0.24
ERCC2P18074 TSEN15P1-201ENST00000423257 515 ntBASIC16.57■□□□□ 0.24
ERCC2P18074 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.57■□□□□ 0.24
ERCC2P18074 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.57■□□□□ 0.24
ERCC2P18074 AL512356.2-201ENST00000546955 174 ntBASIC16.57■□□□□ 0.24
ERCC2P18074 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
ERCC2P18074 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.57■□□□□ 0.24
ERCC2P18074 AC105021.1-202ENST00000570572 669 ntBASIC16.57■□□□□ 0.24
ERCC2P18074 MIR4453-201ENST00000584019 89 ntBASIC16.57■□□□□ 0.24
ERCC2P18074 MIR6080-201ENST00000617359 66 ntBASIC16.57■□□□□ 0.24
ERCC2P18074 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.57■□□□□ 0.24
ERCC2P18074 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
ERCC2P18074 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC2P18074 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC2P18074 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.57■□□□□ 0.24
ERCC2P18074 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC2P18074 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC2P18074 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ERCC2P18074 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC2P18074 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC2P18074 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC2P18074 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.56■□□□□ 0.24
ERCC2P18074 AC132872.4-202ENST00000622924 2756 ntBASIC16.56■□□□□ 0.24
ERCC2P18074 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
ERCC2P18074 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
ERCC2P18074 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC2P18074 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.56■□□□□ 0.24
ERCC2P18074 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC2P18074 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC2P18074 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC2P18074 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
ERCC2P18074 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC2P18074 AC004987.2-201ENST00000395959 1148 ntBASIC16.56■□□□□ 0.24
ERCC2P18074 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC2P18074 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.56■□□□□ 0.24
ERCC2P18074 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.56■□□□□ 0.24
ERCC2P18074 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.56■□□□□ 0.24
ERCC2P18074 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC2P18074 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.56■□□□□ 0.24
ERCC2P18074 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.56■□□□□ 0.24
ERCC2P18074 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.56■□□□□ 0.24
ERCC2P18074 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC2P18074 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC2P18074 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.56■□□□□ 0.24
ERCC2P18074 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.56■□□□□ 0.24
ERCC2P18074 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC2P18074 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC2P18074 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC2P18074 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
ERCC2P18074 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.55■□□□□ 0.24
ERCC2P18074 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC2P18074 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC2P18074 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC2P18074 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC2P18074 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
ERCC2P18074 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
ERCC2P18074 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.55■□□□□ 0.24
ERCC2P18074 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC2P18074 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC2P18074 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
ERCC2P18074 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
ERCC2P18074 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC2P18074 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC2P18074 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
ERCC2P18074 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC2P18074 SPDYE7P-202ENST00000420373 878 ntBASIC16.55■□□□□ 0.24
ERCC2P18074 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC2P18074 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.55■□□□□ 0.24
ERCC2P18074 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.55■□□□□ 0.24
ERCC2P18074 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.55■□□□□ 0.24
ERCC2P18074 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.55■□□□□ 0.24
ERCC2P18074 AC069262.1-201ENST00000539058 672 ntBASIC16.55■□□□□ 0.24
ERCC2P18074 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.55■□□□□ 0.24
ERCC2P18074 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.55■□□□□ 0.24
ERCC2P18074 AC006538.3-201ENST00000612495 578 ntBASIC16.55■□□□□ 0.24
ERCC2P18074 AC007967.4-201ENST00000614700 386 ntBASIC16.55■□□□□ 0.24
ERCC2P18074 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.55■□□□□ 0.24
ERCC2P18074 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC2P18074 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
ERCC2P18074 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC2P18074 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC2P18074 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC2P18074 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC2P18074 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC2P18074 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
ERCC2P18074 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC2P18074 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.55■□□□□ 0.24
ERCC2P18074 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.55■□□□□ 0.24
ERCC2P18074 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC2P18074 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC2P18074 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
ERCC2P18074 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.55■□□□□ 0.24
ERCC2P18074 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
ERCC2P18074 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
ERCC2P18074 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC2P18074 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC2P18074 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
ERCC2P18074 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC2P18074 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC2P18074 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms