Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GAP43P17677 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
GAP43P17677 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GAP43P17677 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.72■□□□□ 0.43
GAP43P17677 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GAP43P17677 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GAP43P17677 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.72■□□□□ 0.43
GAP43P17677 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
GAP43P17677 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GAP43P17677 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GAP43P17677 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
GAP43P17677 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.72■□□□□ 0.43
GAP43P17677 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GAP43P17677 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
GAP43P17677 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.72■□□□□ 0.43
GAP43P17677 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.72■□□□□ 0.43
GAP43P17677 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.72■□□□□ 0.43
GAP43P17677 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.72■□□□□ 0.43
GAP43P17677 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
GAP43P17677 Z92544.3-201ENST00000624747 417 ntBASIC17.72■□□□□ 0.43
GAP43P17677 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
GAP43P17677 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GAP43P17677 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GAP43P17677 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.72■□□□□ 0.43
GAP43P17677 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.72■□□□□ 0.43
GAP43P17677 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GAP43P17677 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GAP43P17677 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GAP43P17677 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
GAP43P17677 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GAP43P17677 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
GAP43P17677 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GAP43P17677 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GAP43P17677 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GAP43P17677 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GAP43P17677 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.71■□□□□ 0.43
GAP43P17677 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
GAP43P17677 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.71■□□□□ 0.43
GAP43P17677 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
GAP43P17677 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GAP43P17677 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.71■□□□□ 0.43
GAP43P17677 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GAP43P17677 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GAP43P17677 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
GAP43P17677 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GAP43P17677 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GAP43P17677 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GAP43P17677 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GAP43P17677 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GAP43P17677 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GAP43P17677 MTND6P24-201ENST00000440466 518 ntBASIC17.71■□□□□ 0.43
GAP43P17677 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.71■□□□□ 0.43
GAP43P17677 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GAP43P17677 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GAP43P17677 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.71■□□□□ 0.43
GAP43P17677 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.71■□□□□ 0.43
GAP43P17677 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GAP43P17677 AC015911.4-201ENST00000588022 1070 ntBASIC17.71■□□□□ 0.43
GAP43P17677 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.71■□□□□ 0.43
GAP43P17677 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.71■□□□□ 0.43
GAP43P17677 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
GAP43P17677 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.71■□□□□ 0.43
GAP43P17677 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
GAP43P17677 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GAP43P17677 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GAP43P17677 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.71■□□□□ 0.43
GAP43P17677 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
GAP43P17677 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GAP43P17677 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.71■□□□□ 0.43
GAP43P17677 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GAP43P17677 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GAP43P17677 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.71■□□□□ 0.43
GAP43P17677 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
GAP43P17677 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.71■□□□□ 0.42
GAP43P17677 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.71■□□□□ 0.42
GAP43P17677 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
GAP43P17677 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GAP43P17677 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GAP43P17677 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
GAP43P17677 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
GAP43P17677 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
GAP43P17677 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GAP43P17677 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
GAP43P17677 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.7■□□□□ 0.42
GAP43P17677 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
GAP43P17677 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GAP43P17677 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GAP43P17677 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
GAP43P17677 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GAP43P17677 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GAP43P17677 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.7■□□□□ 0.42
GAP43P17677 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GAP43P17677 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GAP43P17677 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GAP43P17677 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GAP43P17677 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GAP43P17677 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.7■□□□□ 0.42
GAP43P17677 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GAP43P17677 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GAP43P17677 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms